Hb_001379_020

Information

Type -
Description -
Location Contig1379: 1492-3550
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001379_020 0.0 - - -
2 Hb_004448_030 0.1323810391 - - PREDICTED: RING-H2 finger protein ATL40-like [Jatropha curcas]
3 Hb_000120_700 0.1359961204 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
4 Hb_022115_030 0.1533512794 - - PREDICTED: umecyanin-like [Jatropha curcas]
5 Hb_115007_010 0.160430952 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
6 Hb_001250_140 0.1680410531 - - PREDICTED: cysteine-rich receptor-like protein kinase 2 [Jatropha curcas]
7 Hb_135392_010 0.1686885728 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Jatropha curcas]
8 Hb_023732_020 0.1709129115 - - PREDICTED: fatty acyl-CoA reductase 3-like [Jatropha curcas]
9 Hb_081224_010 0.1729859802 - - hypothetical protein OsJ_17572 [Oryza sativa Japonica Group]
10 Hb_004503_010 0.1754797985 - - PREDICTED: EG45-like domain containing protein [Prunus mume]
11 Hb_000445_020 0.1758370045 - - GABA-specific permease, putative [Ricinus communis]
12 Hb_006620_040 0.1766946327 - - PREDICTED: probable 6-phosphogluconolactonase 1 [Jatropha curcas]
13 Hb_000712_060 0.1800452509 - - PREDICTED: uncharacterized protein LOC105631517 [Jatropha curcas]
14 Hb_021419_060 0.1823322092 - - LRR receptor-like serine/threonine-protein kinase, putative [Theobroma cacao]
15 Hb_007491_010 0.1834034181 - - Spotted leaf protein, putative [Ricinus communis]
16 Hb_003189_030 0.1843188879 - - hypothetical protein Csa_4G304750 [Cucumis sativus]
17 Hb_000483_020 0.1856178104 - - PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like isoform X2 [Jatropha curcas]
18 Hb_000679_070 0.1873950992 - - hypothetical protein POPTR_0006s26840g [Populus trichocarpa]
19 Hb_011282_070 0.187747371 - - ATP binding protein, putative [Ricinus communis]
20 Hb_023080_010 0.1880435579 - - PREDICTED: probable serine incorporator [Jatropha curcas]

Gene co-expression network

sample Hb_001379_020 Hb_001379_020 Hb_004448_030 Hb_004448_030 Hb_001379_020--Hb_004448_030 Hb_000120_700 Hb_000120_700 Hb_001379_020--Hb_000120_700 Hb_022115_030 Hb_022115_030 Hb_001379_020--Hb_022115_030 Hb_115007_010 Hb_115007_010 Hb_001379_020--Hb_115007_010 Hb_001250_140 Hb_001250_140 Hb_001379_020--Hb_001250_140 Hb_135392_010 Hb_135392_010 Hb_001379_020--Hb_135392_010 Hb_004448_030--Hb_135392_010 Hb_007491_010 Hb_007491_010 Hb_004448_030--Hb_007491_010 Hb_004448_030--Hb_000120_700 Hb_007417_020 Hb_007417_020 Hb_004448_030--Hb_007417_020 Hb_021419_060 Hb_021419_060 Hb_004448_030--Hb_021419_060 Hb_001464_010 Hb_001464_010 Hb_004448_030--Hb_001464_010 Hb_000120_700--Hb_022115_030 Hb_023732_020 Hb_023732_020 Hb_000120_700--Hb_023732_020 Hb_032717_030 Hb_032717_030 Hb_000120_700--Hb_032717_030 Hb_000120_700--Hb_115007_010 Hb_003073_020 Hb_003073_020 Hb_000120_700--Hb_003073_020 Hb_022115_030--Hb_032717_030 Hb_005433_050 Hb_005433_050 Hb_022115_030--Hb_005433_050 Hb_022115_030--Hb_003073_020 Hb_022115_030--Hb_023732_020 Hb_000483_020 Hb_000483_020 Hb_022115_030--Hb_000483_020 Hb_007342_020 Hb_007342_020 Hb_115007_010--Hb_007342_020 Hb_000537_120 Hb_000537_120 Hb_115007_010--Hb_000537_120 Hb_115007_010--Hb_000483_020 Hb_001114_220 Hb_001114_220 Hb_115007_010--Hb_001114_220 Hb_064398_010 Hb_064398_010 Hb_115007_010--Hb_064398_010 Hb_058620_010 Hb_058620_010 Hb_001250_140--Hb_058620_010 Hb_002311_240 Hb_002311_240 Hb_001250_140--Hb_002311_240 Hb_000352_080 Hb_000352_080 Hb_001250_140--Hb_000352_080 Hb_012506_080 Hb_012506_080 Hb_001250_140--Hb_012506_080 Hb_001250_140--Hb_135392_010 Hb_001134_040 Hb_001134_040 Hb_001250_140--Hb_001134_040 Hb_135392_010--Hb_007417_020 Hb_135392_010--Hb_007491_010 Hb_135392_010--Hb_001134_040 Hb_135392_010--Hb_058620_010 Hb_135392_010--Hb_001464_010 Hb_004097_080 Hb_004097_080 Hb_135392_010--Hb_004097_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.17462 0.0264423 0 0 0.0993427
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0309571 0 4.40033 0.320786

CAGE analysis