Hb_001386_140

Information

Type -
Description -
Location Contig1386: 181488-181963
Sequence    

Annotation

kegg
ID rcu:RCOM_1677160
description B2 protein, putative
nr
ID XP_012070379.1
description PREDICTED: B2 protein [Jatropha curcas]
swissprot
ID P37707
description B2 protein OS=Daucus carota PE=2 SV=1
trembl
ID A0A067LCT9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10121 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001386_140 0.0 - - PREDICTED: B2 protein [Jatropha curcas]
2 Hb_010565_010 0.0856855852 - - PREDICTED: N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase-like isoform X2 [Populus euphratica]
3 Hb_005023_030 0.1104120255 - - PREDICTED: uncharacterized protein LOC103417254 [Malus domestica]
4 Hb_006663_090 0.1117025285 - - hypothetical protein B456_010G1255001, partial [Gossypium raimondii]
5 Hb_002067_120 0.1187616544 - - PREDICTED: uncharacterized protein LOC105111554 isoform X1 [Populus euphratica]
6 Hb_115477_010 0.1231208878 - - Protein dom-3, putative [Ricinus communis]
7 Hb_054586_020 0.1325692949 - - PREDICTED: exocyst complex component EXO70A1 [Jatropha curcas]
8 Hb_002974_050 0.1343203883 - - -
9 Hb_001135_140 0.1373050639 - - PREDICTED: serine/threonine-protein kinase PBS1-like [Malus domestica]
10 Hb_030328_010 0.1379193955 - - hypothetical protein CICLE_v10015936mg [Citrus clementina]
11 Hb_076875_020 0.1407586522 - - PREDICTED: alpha/beta hydrolase domain-containing protein 17B [Jatropha curcas]
12 Hb_000991_070 0.1448036712 - - phytochrome A specific signal transduction component family protein [Populus trichocarpa]
13 Hb_000825_030 0.1451886615 - - zinc binding dehydrogenase, putative [Ricinus communis]
14 Hb_115107_010 0.1475991023 - - Early-responsive to dehydration stress protein (ERD4) isoform 1 [Theobroma cacao]
15 Hb_081517_010 0.1493226779 - - PREDICTED: putative potassium transporter 12 isoform X2 [Jatropha curcas]
16 Hb_001623_300 0.1506968537 - - PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Jatropha curcas]
17 Hb_007026_040 0.1507553904 - - PREDICTED: chaperonin 60 subunit alpha 2, chloroplastic-like [Eucalyptus grandis]
18 Hb_004934_070 0.154644103 - - PREDICTED: U2 small nuclear ribonucleoprotein A' [Jatropha curcas]
19 Hb_006487_060 0.1572175954 - - Defective in cullin neddylation protein, putative [Ricinus communis]
20 Hb_000107_200 0.1573928058 - - hypothetical protein B456_005G214800 [Gossypium raimondii]

Gene co-expression network

sample Hb_001386_140 Hb_001386_140 Hb_010565_010 Hb_010565_010 Hb_001386_140--Hb_010565_010 Hb_005023_030 Hb_005023_030 Hb_001386_140--Hb_005023_030 Hb_006663_090 Hb_006663_090 Hb_001386_140--Hb_006663_090 Hb_002067_120 Hb_002067_120 Hb_001386_140--Hb_002067_120 Hb_115477_010 Hb_115477_010 Hb_001386_140--Hb_115477_010 Hb_054586_020 Hb_054586_020 Hb_001386_140--Hb_054586_020 Hb_010565_010--Hb_002067_120 Hb_000606_080 Hb_000606_080 Hb_010565_010--Hb_000606_080 Hb_010565_010--Hb_005023_030 Hb_004934_070 Hb_004934_070 Hb_010565_010--Hb_004934_070 Hb_005714_130 Hb_005714_130 Hb_010565_010--Hb_005714_130 Hb_000107_200 Hb_000107_200 Hb_005023_030--Hb_000107_200 Hb_001135_140 Hb_001135_140 Hb_005023_030--Hb_001135_140 Hb_005023_030--Hb_002067_120 Hb_026228_020 Hb_026228_020 Hb_005023_030--Hb_026228_020 Hb_000825_030 Hb_000825_030 Hb_006663_090--Hb_000825_030 Hb_006663_090--Hb_115477_010 Hb_068014_010 Hb_068014_010 Hb_006663_090--Hb_068014_010 Hb_006487_060 Hb_006487_060 Hb_006663_090--Hb_006487_060 Hb_005679_070 Hb_005679_070 Hb_006663_090--Hb_005679_070 Hb_012023_020 Hb_012023_020 Hb_002067_120--Hb_012023_020 Hb_006951_020 Hb_006951_020 Hb_002067_120--Hb_006951_020 Hb_002067_120--Hb_000107_200 Hb_126295_010 Hb_126295_010 Hb_002067_120--Hb_126295_010 Hb_002067_120--Hb_000606_080 Hb_115107_010 Hb_115107_010 Hb_115477_010--Hb_115107_010 Hb_168973_010 Hb_168973_010 Hb_115477_010--Hb_168973_010 Hb_007026_040 Hb_007026_040 Hb_115477_010--Hb_007026_040 Hb_115477_010--Hb_010565_010 Hb_006132_100 Hb_006132_100 Hb_054586_020--Hb_006132_100 Hb_054586_020--Hb_010565_010 Hb_058702_010 Hb_058702_010 Hb_054586_020--Hb_058702_010 Hb_007333_040 Hb_007333_040 Hb_054586_020--Hb_007333_040 Hb_030328_010 Hb_030328_010 Hb_054586_020--Hb_030328_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
130.835 132.949 53.8042 246.942 83.2072 505.003
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
140.98 84.8384 123.662 86.0259 67.7353

CAGE analysis