Hb_001386_150

Information

Type -
Description -
Location Contig1386: 183163-186848
Sequence    

Annotation

kegg
ID rcu:RCOM_1113060
description leucine-rich repeat receptor protein kinase exs precursor, putative (EC:1.3.1.74)
nr
ID XP_002531725.1
description leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
swissprot
ID Q9ZPS9
description Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL2 PE=1 SV=1
trembl
ID B9T0F6
description Leucine-rich repeat receptor protein kinase exs, putative OS=Ricinus communis GN=RCOM_1113060 PE=4 SV=1
Gene Ontology
ID GO:0016491
description lrr receptor-like serine threonine-protein kinase gso1 isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_10592: 183239-183398
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001386_150 0.0 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
2 Hb_005050_050 0.140234745 - - PREDICTED: wall-associated receptor kinase 5-like [Glycine max]
3 Hb_126933_010 0.1452055474 - - PREDICTED: reticulon-like protein B5 [Jatropha curcas]
4 Hb_010683_060 0.1474964034 - - hypothetical protein CISIN_1g046469mg, partial [Citrus sinensis]
5 Hb_007101_270 0.1537333902 - - PREDICTED: uncharacterized protein LOC105640496 [Jatropha curcas]
6 Hb_002107_040 0.1649066963 - - PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 2 [Jatropha curcas]
7 Hb_005976_090 0.1697698764 - - DNA binding protein, putative [Ricinus communis]
8 Hb_003055_030 0.1787372937 - - PREDICTED: glycine-rich cell wall structural protein 2 [Jatropha curcas]
9 Hb_126933_020 0.1824678904 - - PREDICTED: uncharacterized protein LOC105638525 [Jatropha curcas]
10 Hb_003020_070 0.1833027853 - - PREDICTED: uncharacterized protein LOC103997323 [Musa acuminata subsp. malaccensis]
11 Hb_000891_010 0.185316586 - - conserved hypothetical protein [Ricinus communis]
12 Hb_002890_160 0.1888829885 - - PREDICTED: protein root UVB sensitive 6 isoform X1 [Jatropha curcas]
13 Hb_010683_070 0.1918533973 - - PREDICTED: DNA (cytosine-5)-methyltransferase CMT2 isoform X1 [Jatropha curcas]
14 Hb_001244_050 0.1935255918 - - PREDICTED: uncharacterized protein LOC105643334 [Jatropha curcas]
15 Hb_000283_030 0.1972296719 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA16-like [Populus euphratica]
16 Hb_016687_010 0.200902234 - - PREDICTED: uncharacterized protein LOC105637401 [Jatropha curcas]
17 Hb_010584_020 0.2013628842 - - PREDICTED: probable polygalacturonase [Jatropha curcas]
18 Hb_002027_100 0.2030103981 - - conserved hypothetical protein [Ricinus communis]
19 Hb_010863_030 0.2039699066 - - PREDICTED: uncharacterized protein LOC105642466 [Jatropha curcas]
20 Hb_001347_030 0.2055165157 - - ubiquitin-protein ligase, putative [Ricinus communis]

Gene co-expression network

sample Hb_001386_150 Hb_001386_150 Hb_005050_050 Hb_005050_050 Hb_001386_150--Hb_005050_050 Hb_126933_010 Hb_126933_010 Hb_001386_150--Hb_126933_010 Hb_010683_060 Hb_010683_060 Hb_001386_150--Hb_010683_060 Hb_007101_270 Hb_007101_270 Hb_001386_150--Hb_007101_270 Hb_002107_040 Hb_002107_040 Hb_001386_150--Hb_002107_040 Hb_005976_090 Hb_005976_090 Hb_001386_150--Hb_005976_090 Hb_005050_050--Hb_007101_270 Hb_003020_070 Hb_003020_070 Hb_005050_050--Hb_003020_070 Hb_000212_270 Hb_000212_270 Hb_005050_050--Hb_000212_270 Hb_002890_160 Hb_002890_160 Hb_005050_050--Hb_002890_160 Hb_010683_070 Hb_010683_070 Hb_005050_050--Hb_010683_070 Hb_126933_010--Hb_005976_090 Hb_126933_010--Hb_005050_050 Hb_016687_010 Hb_016687_010 Hb_126933_010--Hb_016687_010 Hb_126933_010--Hb_002890_160 Hb_003371_010 Hb_003371_010 Hb_126933_010--Hb_003371_010 Hb_000891_010 Hb_000891_010 Hb_010683_060--Hb_000891_010 Hb_002997_110 Hb_002997_110 Hb_010683_060--Hb_002997_110 Hb_001141_350 Hb_001141_350 Hb_010683_060--Hb_001141_350 Hb_173660_010 Hb_173660_010 Hb_010683_060--Hb_173660_010 Hb_000917_200 Hb_000917_200 Hb_010683_060--Hb_000917_200 Hb_007101_270--Hb_003020_070 Hb_007101_270--Hb_002890_160 Hb_007101_270--Hb_010683_070 Hb_006789_030 Hb_006789_030 Hb_007101_270--Hb_006789_030 Hb_005486_020 Hb_005486_020 Hb_007101_270--Hb_005486_020 Hb_137600_010 Hb_137600_010 Hb_002107_040--Hb_137600_010 Hb_001227_140 Hb_001227_140 Hb_002107_040--Hb_001227_140 Hb_005488_190 Hb_005488_190 Hb_002107_040--Hb_005488_190 Hb_126933_020 Hb_126933_020 Hb_002107_040--Hb_126933_020 Hb_000479_210 Hb_000479_210 Hb_002107_040--Hb_000479_210 Hb_000679_080 Hb_000679_080 Hb_002107_040--Hb_000679_080 Hb_005976_090--Hb_016687_010 Hb_005976_090--Hb_003371_010 Hb_004920_020 Hb_004920_020 Hb_005976_090--Hb_004920_020 Hb_124677_010 Hb_124677_010 Hb_005976_090--Hb_124677_010 Hb_000950_020 Hb_000950_020 Hb_005976_090--Hb_000950_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.118643 0.12179 0.707401 0.178981 0.0294859 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0923513 0.454637

CAGE analysis