Hb_001391_050

Information

Type -
Description -
Location Contig1391: 34312-35320
Sequence    

Annotation

kegg
ID pop:POPTR_0019s02210g
description hypothetical protein
nr
ID XP_012079701.1
description PREDICTED: probable carboxylesterase 18 [Jatropha curcas]
swissprot
ID Q9MAA7
description Gibberellin receptor GID1A OS=Arabidopsis thaliana GN=GID1A PE=1 SV=1
trembl
ID A0A067KH62
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14825 PE=4 SV=1
Gene Ontology
ID GO:0016787
description probable carboxylesterase 18

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001391_050 0.0 - - PREDICTED: probable carboxylesterase 18 [Jatropha curcas]
2 Hb_005601_030 0.1903663488 - - organic anion transporter, putative [Ricinus communis]
3 Hb_183671_010 0.207531547 - - serine carboxypeptidase, putative [Ricinus communis]
4 Hb_115832_010 0.2239973568 - - transcription factor, putative [Ricinus communis]
5 Hb_047560_010 0.2241632414 - - PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase [Jatropha curcas]
6 Hb_000107_260 0.2296630555 - - -
7 Hb_000375_140 0.2349334616 - - PREDICTED: monoacylglycerol lipase ABHD6 [Jatropha curcas]
8 Hb_006663_110 0.2350520703 - - PREDICTED: U-box domain-containing protein 34-like [Camelina sativa]
9 Hb_000191_140 0.252491071 - - PREDICTED: growth-regulating factor 1-like isoform X2 [Jatropha curcas]
10 Hb_005276_030 0.2526882494 - - PREDICTED: probable inactive patatin-like protein 9 [Jatropha curcas]
11 Hb_000977_200 0.253691499 - - PREDICTED: acyl-[acyl-carrier-protein] desaturase, chloroplastic-like [Jatropha curcas]
12 Hb_000016_050 0.2655072334 - - PREDICTED: uncharacterized protein LOC105648535 [Jatropha curcas]
13 Hb_000105_110 0.2677564524 - - hypothetical protein, partial [Fervidibacteria bacterium SCGC AAA471-D06]
14 Hb_002343_030 0.2683683349 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000313_330 0.2691760818 - - PREDICTED: glucan endo-1,3-beta-glucosidase [Jatropha curcas]
16 Hb_001688_090 0.2791479084 - - alcohol dehydrogenase 7 [Vitis vinifera]
17 Hb_001621_120 0.2796771952 - - Zeamatin precursor, putative [Ricinus communis]
18 Hb_002164_010 0.2815093544 - - Stellacyanin, putative [Ricinus communis]
19 Hb_001377_430 0.2844773517 - - PREDICTED: laccase-6 [Jatropha curcas]
20 Hb_074419_010 0.2848768915 - - PREDICTED: uncharacterized protein LOC105637596 [Jatropha curcas]

Gene co-expression network

sample Hb_001391_050 Hb_001391_050 Hb_005601_030 Hb_005601_030 Hb_001391_050--Hb_005601_030 Hb_183671_010 Hb_183671_010 Hb_001391_050--Hb_183671_010 Hb_115832_010 Hb_115832_010 Hb_001391_050--Hb_115832_010 Hb_047560_010 Hb_047560_010 Hb_001391_050--Hb_047560_010 Hb_000107_260 Hb_000107_260 Hb_001391_050--Hb_000107_260 Hb_000375_140 Hb_000375_140 Hb_001391_050--Hb_000375_140 Hb_005601_030--Hb_183671_010 Hb_005601_030--Hb_115832_010 Hb_019181_020 Hb_019181_020 Hb_005601_030--Hb_019181_020 Hb_005601_030--Hb_047560_010 Hb_000105_110 Hb_000105_110 Hb_005601_030--Hb_000105_110 Hb_183671_010--Hb_115832_010 Hb_006663_110 Hb_006663_110 Hb_183671_010--Hb_006663_110 Hb_183671_010--Hb_019181_020 Hb_120820_010 Hb_120820_010 Hb_183671_010--Hb_120820_010 Hb_115832_010--Hb_006663_110 Hb_000345_180 Hb_000345_180 Hb_115832_010--Hb_000345_180 Hb_007617_040 Hb_007617_040 Hb_115832_010--Hb_007617_040 Hb_144547_010 Hb_144547_010 Hb_047560_010--Hb_144547_010 Hb_143933_010 Hb_143933_010 Hb_047560_010--Hb_143933_010 Hb_130739_010 Hb_130739_010 Hb_047560_010--Hb_130739_010 Hb_000197_170 Hb_000197_170 Hb_047560_010--Hb_000197_170 Hb_000977_200 Hb_000977_200 Hb_000107_260--Hb_000977_200 Hb_000816_190 Hb_000816_190 Hb_000107_260--Hb_000816_190 Hb_001514_250 Hb_001514_250 Hb_000107_260--Hb_001514_250 Hb_008119_030 Hb_008119_030 Hb_000107_260--Hb_008119_030 Hb_000191_140 Hb_000191_140 Hb_000107_260--Hb_000191_140 Hb_118939_010 Hb_118939_010 Hb_000107_260--Hb_118939_010 Hb_002164_010 Hb_002164_010 Hb_000375_140--Hb_002164_010 Hb_002774_120 Hb_002774_120 Hb_000375_140--Hb_002774_120 Hb_000313_330 Hb_000313_330 Hb_000375_140--Hb_000313_330 Hb_002003_090 Hb_002003_090 Hb_000375_140--Hb_002003_090 Hb_107658_010 Hb_107658_010 Hb_000375_140--Hb_107658_010 Hb_003536_090 Hb_003536_090 Hb_000375_140--Hb_003536_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.12201 0.983485 12.2021 19.0601 0.153287 0.32008
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.535436 0 0.231834 0.406874 0.686935

CAGE analysis