Hb_001405_250

Information

Type -
Description -
Location Contig1405: 296979-298205
Sequence    

Annotation

kegg
ID pop:POPTR_0004s08210g
description POPTRDRAFT_858731; hypothetical protein
nr
ID XP_012086446.1
description PREDICTED: uncharacterized protein LOC105645451 [Jatropha curcas]
swissprot
ID Q94II3
description Probable methyltransferase PMT21 OS=Arabidopsis thaliana GN=ERD3 PE=2 SV=1
trembl
ID A0A067JPM2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22544 PE=4 SV=1
Gene Ontology
ID GO:0008168
description probable methyltransferase pmt19

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001405_250 0.0 - - PREDICTED: uncharacterized protein LOC105645451 [Jatropha curcas]
2 Hb_006395_020 0.1203496606 - - hypothetical protein RCOM_0725510 [Ricinus communis]
3 Hb_074672_010 0.1235667859 - - receptor serine/threonine kinase, putative [Ricinus communis]
4 Hb_000025_490 0.1266222151 - - PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Jatropha curcas]
5 Hb_067028_010 0.1326384422 - - BnaC03g72040D [Brassica napus]
6 Hb_001846_030 0.1333900235 - - PREDICTED: cytochrome P450 94A2-like [Jatropha curcas]
7 Hb_002119_030 0.1336001238 - - PREDICTED: U-box domain-containing protein 21-like [Jatropha curcas]
8 Hb_167186_010 0.1384173886 - - cation-transporting atpase plant, putative [Ricinus communis]
9 Hb_032071_010 0.1438975279 - - hypothetical protein EUGRSUZ_J02969 [Eucalyptus grandis]
10 Hb_001515_040 0.1444791015 - - -
11 Hb_002391_020 0.1486095898 transcription factor TF Family: NAC PREDICTED: putative NAC domain-containing protein 94 [Jatropha curcas]
12 Hb_000433_050 0.1501811547 - - PREDICTED: cell number regulator 1 isoform X1 [Vitis vinifera]
13 Hb_003119_030 0.1510814538 - - PREDICTED: classical arabinogalactan protein 1-like [Jatropha curcas]
14 Hb_179363_010 0.1520902369 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
15 Hb_171974_010 0.1534361476 - - aldo-keto reductase, putative [Ricinus communis]
16 Hb_008725_220 0.1567102787 - - PREDICTED: uncharacterized protein LOC105642593 [Jatropha curcas]
17 Hb_000959_240 0.1593369406 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
18 Hb_101437_010 0.1601757708 - - PREDICTED: protein P21-like [Jatropha curcas]
19 Hb_020367_010 0.1602382397 - - hypothetical protein PRUPE_ppa004271mg [Prunus persica]
20 Hb_116352_010 0.1605302805 - - kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_001405_250 Hb_001405_250 Hb_006395_020 Hb_006395_020 Hb_001405_250--Hb_006395_020 Hb_074672_010 Hb_074672_010 Hb_001405_250--Hb_074672_010 Hb_000025_490 Hb_000025_490 Hb_001405_250--Hb_000025_490 Hb_067028_010 Hb_067028_010 Hb_001405_250--Hb_067028_010 Hb_001846_030 Hb_001846_030 Hb_001405_250--Hb_001846_030 Hb_002119_030 Hb_002119_030 Hb_001405_250--Hb_002119_030 Hb_000302_150 Hb_000302_150 Hb_006395_020--Hb_000302_150 Hb_006395_020--Hb_067028_010 Hb_012404_050 Hb_012404_050 Hb_006395_020--Hb_012404_050 Hb_167186_010 Hb_167186_010 Hb_006395_020--Hb_167186_010 Hb_001922_100 Hb_001922_100 Hb_006395_020--Hb_001922_100 Hb_120011_010 Hb_120011_010 Hb_074672_010--Hb_120011_010 Hb_077694_010 Hb_077694_010 Hb_074672_010--Hb_077694_010 Hb_006615_060 Hb_006615_060 Hb_074672_010--Hb_006615_060 Hb_000959_240 Hb_000959_240 Hb_074672_010--Hb_000959_240 Hb_017693_040 Hb_017693_040 Hb_074672_010--Hb_017693_040 Hb_001619_140 Hb_001619_140 Hb_074672_010--Hb_001619_140 Hb_008725_220 Hb_008725_220 Hb_000025_490--Hb_008725_220 Hb_000025_490--Hb_002119_030 Hb_000025_490--Hb_000959_240 Hb_001515_040 Hb_001515_040 Hb_000025_490--Hb_001515_040 Hb_000025_490--Hb_167186_010 Hb_101437_010 Hb_101437_010 Hb_000025_490--Hb_101437_010 Hb_067028_010--Hb_002119_030 Hb_067028_010--Hb_000302_150 Hb_067028_010--Hb_001922_100 Hb_067028_010--Hb_167186_010 Hb_008948_070 Hb_008948_070 Hb_001846_030--Hb_008948_070 Hb_032071_010 Hb_032071_010 Hb_001846_030--Hb_032071_010 Hb_006478_140 Hb_006478_140 Hb_001846_030--Hb_006478_140 Hb_012022_020 Hb_012022_020 Hb_001846_030--Hb_012022_020 Hb_001846_030--Hb_017693_040 Hb_000192_030 Hb_000192_030 Hb_001846_030--Hb_000192_030 Hb_002119_030--Hb_167186_010 Hb_002119_030--Hb_008725_220 Hb_002119_030--Hb_000959_240 Hb_005054_330 Hb_005054_330 Hb_002119_030--Hb_005054_330
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.175502 0.132727 0.0142291 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0124441 0

CAGE analysis