Hb_001417_090

Information

Type -
Description -
Location Contig1417: 131646-132032
Sequence    

Annotation

kegg
ID rcu:RCOM_1618720
description hypothetical protein
nr
ID XP_012092928.1
description PREDICTED: uncharacterized protein LOC105650625 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067J8N7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05831 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001417_090 0.0 - - PREDICTED: uncharacterized protein LOC105650625 [Jatropha curcas]
2 Hb_120040_010 0.0878071265 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
3 Hb_001856_130 0.0912706975 - - hypothetical protein CISIN_1g022795mg [Citrus sinensis]
4 Hb_000739_190 0.1059574574 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
5 Hb_004970_100 0.1066211177 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor B-4 [Jatropha curcas]
6 Hb_000614_120 0.1082293538 - - hypothetical protein JCGZ_17923 [Jatropha curcas]
7 Hb_000120_560 0.1100459891 - - protein with unknown function [Ricinus communis]
8 Hb_003427_070 0.1126555189 - - hypothetical protein POPTR_0067s00310g [Populus trichocarpa]
9 Hb_084304_010 0.1128222631 - - PREDICTED: probable auxin efflux carrier component 1c isoform X2 [Jatropha curcas]
10 Hb_008021_050 0.119478975 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
11 Hb_000120_600 0.1219050951 - - PREDICTED: uncharacterized protein LOC105628582 [Jatropha curcas]
12 Hb_000646_040 0.122795298 - - PREDICTED: thiamine-repressible mitochondrial transport protein THI74-like [Jatropha curcas]
13 Hb_001675_290 0.1238675936 - - PREDICTED: transcription factor bHLH68-like isoform X1 [Jatropha curcas]
14 Hb_077694_020 0.1266782 - - SAUR family protein [Theobroma cacao]
15 Hb_005111_020 0.1272498156 - - hypothetical protein CISIN_1g0417821mg, partial [Citrus sinensis]
16 Hb_025194_070 0.1322234625 - - PREDICTED: ACT domain-containing protein ACR4-like [Jatropha curcas]
17 Hb_030360_010 0.1324585969 - - -
18 Hb_000000_320 0.133617423 - - PREDICTED: calcium uniporter protein 4, mitochondrial [Jatropha curcas]
19 Hb_007919_010 0.1336774149 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001677_190 0.1337292095 - - ATP-binding cassette transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_001417_090 Hb_001417_090 Hb_120040_010 Hb_120040_010 Hb_001417_090--Hb_120040_010 Hb_001856_130 Hb_001856_130 Hb_001417_090--Hb_001856_130 Hb_000739_190 Hb_000739_190 Hb_001417_090--Hb_000739_190 Hb_004970_100 Hb_004970_100 Hb_001417_090--Hb_004970_100 Hb_000614_120 Hb_000614_120 Hb_001417_090--Hb_000614_120 Hb_000120_560 Hb_000120_560 Hb_001417_090--Hb_000120_560 Hb_008021_050 Hb_008021_050 Hb_120040_010--Hb_008021_050 Hb_120040_010--Hb_001856_130 Hb_000149_020 Hb_000149_020 Hb_120040_010--Hb_000149_020 Hb_009225_070 Hb_009225_070 Hb_120040_010--Hb_009225_070 Hb_002522_040 Hb_002522_040 Hb_120040_010--Hb_002522_040 Hb_000120_600 Hb_000120_600 Hb_001856_130--Hb_000120_600 Hb_153180_010 Hb_153180_010 Hb_001856_130--Hb_153180_010 Hb_001953_010 Hb_001953_010 Hb_001856_130--Hb_001953_010 Hb_000000_320 Hb_000000_320 Hb_001856_130--Hb_000000_320 Hb_003427_070 Hb_003427_070 Hb_000739_190--Hb_003427_070 Hb_030360_010 Hb_030360_010 Hb_000739_190--Hb_030360_010 Hb_000684_110 Hb_000684_110 Hb_000739_190--Hb_000684_110 Hb_039075_010 Hb_039075_010 Hb_000739_190--Hb_039075_010 Hb_000310_040 Hb_000310_040 Hb_000739_190--Hb_000310_040 Hb_001110_060 Hb_001110_060 Hb_000739_190--Hb_001110_060 Hb_006026_020 Hb_006026_020 Hb_004970_100--Hb_006026_020 Hb_003777_150 Hb_003777_150 Hb_004970_100--Hb_003777_150 Hb_005214_050 Hb_005214_050 Hb_004970_100--Hb_005214_050 Hb_000373_260 Hb_000373_260 Hb_004970_100--Hb_000373_260 Hb_004031_050 Hb_004031_050 Hb_004970_100--Hb_004031_050 Hb_000614_120--Hb_000120_560 Hb_007919_010 Hb_007919_010 Hb_000614_120--Hb_007919_010 Hb_000098_230 Hb_000098_230 Hb_000614_120--Hb_000098_230 Hb_006351_050 Hb_006351_050 Hb_000614_120--Hb_006351_050 Hb_000614_120--Hb_008021_050 Hb_000497_080 Hb_000497_080 Hb_000614_120--Hb_000497_080 Hb_000646_040 Hb_000646_040 Hb_000120_560--Hb_000646_040 Hb_003023_030 Hb_003023_030 Hb_000120_560--Hb_003023_030 Hb_000175_370 Hb_000175_370 Hb_000120_560--Hb_000175_370 Hb_000139_390 Hb_000139_390 Hb_000120_560--Hb_000139_390 Hb_002186_170 Hb_002186_170 Hb_000120_560--Hb_002186_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 12.4817 14.1953 56.9782 0 0.163574
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.5008 0 2.73675 5.80054

CAGE analysis