Hb_001421_040

Information

Type -
Description -
Location Contig1421: 81515-93359
Sequence    

Annotation

kegg
ID rcu:RCOM_1278010
description type I inositol polyphosphate 5-phosphatase, putative (EC:1.3.1.74)
nr
ID XP_012086007.1
description PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase 2 [Jatropha curcas]
swissprot
ID Q9FUR2
description Type I inositol 1,4,5-trisphosphate 5-phosphatase 2 OS=Arabidopsis thaliana GN=IP5P2 PE=1 SV=2
trembl
ID A0A067LLA8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17471 PE=4 SV=1
Gene Ontology
ID GO:0032440
description type i inositol -trisphosphate 5-phosphatase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_11247: 81312-92717 , PASA_asmbl_11248: 91984-92339 , PASA_asmbl_11249: 82268-89344
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001421_040 0.0 - - PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase 2 [Jatropha curcas]
2 Hb_001377_060 0.14380681 - - PREDICTED: pentatricopeptide repeat-containing protein At4g01030, mitochondrial [Jatropha curcas]
3 Hb_001728_110 0.1438820225 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF039-like [Jatropha curcas]
4 Hb_002043_100 0.1479536798 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001907_080 0.1604433884 - - PREDICTED: uncharacterized protein LOC105628749 [Jatropha curcas]
6 Hb_000007_030 0.1710342885 - - PREDICTED: chaperonin 60 subunit beta 4, chloroplastic isoform X1 [Jatropha curcas]
7 Hb_002835_090 0.1847924079 - - RecName: Full=Elongation factor Tu, chloroplastic; Short=EF-Tu; Flags: Precursor [Glycine max]
8 Hb_004712_200 0.1868251425 - - hypothetical protein CICLE_v10010292mg [Citrus clementina]
9 Hb_000035_340 0.1885873904 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000254_120 0.1895479629 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000574_040 0.1905564675 - - PREDICTED: triphosphate tunel metalloenzyme 3-like isoform X1 [Jatropha curcas]
12 Hb_000193_220 0.194642859 - - PREDICTED: ribulose-phosphate 3-epimerase, chloroplastic [Jatropha curcas]
13 Hb_004048_030 0.1948365746 - - hypothetical protein B456_009G371200, partial [Gossypium raimondii]
14 Hb_181838_010 0.1974072956 - - PREDICTED: uncharacterized protein LOC105631275 [Jatropha curcas]
15 Hb_000029_330 0.1997538596 - - PREDICTED: protein TIC 62, chloroplastic [Jatropha curcas]
16 Hb_000966_040 0.2004160008 - - hypothetical protein JCGZ_01642 [Jatropha curcas]
17 Hb_010068_090 0.2030020081 - - hypothetical protein JCGZ_00885 [Jatropha curcas]
18 Hb_005488_190 0.2036116956 - - RNA polymerase sigma factor rpoD, putative [Ricinus communis]
19 Hb_001584_050 0.2044979935 - - PREDICTED: NHL repeat-containing protein 2 isoform X1 [Jatropha curcas]
20 Hb_005399_050 0.2046888146 - - DNA-directed RNA polymerase subunit beta [Glycine soja]

Gene co-expression network

sample Hb_001421_040 Hb_001421_040 Hb_001377_060 Hb_001377_060 Hb_001421_040--Hb_001377_060 Hb_001728_110 Hb_001728_110 Hb_001421_040--Hb_001728_110 Hb_002043_100 Hb_002043_100 Hb_001421_040--Hb_002043_100 Hb_001907_080 Hb_001907_080 Hb_001421_040--Hb_001907_080 Hb_000007_030 Hb_000007_030 Hb_001421_040--Hb_000007_030 Hb_002835_090 Hb_002835_090 Hb_001421_040--Hb_002835_090 Hb_001377_060--Hb_002835_090 Hb_000254_120 Hb_000254_120 Hb_001377_060--Hb_000254_120 Hb_004712_200 Hb_004712_200 Hb_001377_060--Hb_004712_200 Hb_000193_220 Hb_000193_220 Hb_001377_060--Hb_000193_220 Hb_010721_020 Hb_010721_020 Hb_001377_060--Hb_010721_020 Hb_001584_050 Hb_001584_050 Hb_001377_060--Hb_001584_050 Hb_003177_050 Hb_003177_050 Hb_001728_110--Hb_003177_050 Hb_005488_190 Hb_005488_190 Hb_001728_110--Hb_005488_190 Hb_000373_200 Hb_000373_200 Hb_001728_110--Hb_000373_200 Hb_000679_080 Hb_000679_080 Hb_001728_110--Hb_000679_080 Hb_001231_010 Hb_001231_010 Hb_001728_110--Hb_001231_010 Hb_002043_100--Hb_001907_080 Hb_069512_010 Hb_069512_010 Hb_002043_100--Hb_069512_010 Hb_002043_100--Hb_001377_060 Hb_016687_010 Hb_016687_010 Hb_002043_100--Hb_016687_010 Hb_002043_100--Hb_005488_190 Hb_001907_080--Hb_000193_220 Hb_009692_040 Hb_009692_040 Hb_001907_080--Hb_009692_040 Hb_001907_080--Hb_010721_020 Hb_002960_040 Hb_002960_040 Hb_001907_080--Hb_002960_040 Hb_000118_090 Hb_000118_090 Hb_001907_080--Hb_000118_090 Hb_000787_210 Hb_000787_210 Hb_000007_030--Hb_000787_210 Hb_005063_060 Hb_005063_060 Hb_000007_030--Hb_005063_060 Hb_002814_010 Hb_002814_010 Hb_000007_030--Hb_002814_010 Hb_004291_050 Hb_004291_050 Hb_000007_030--Hb_004291_050 Hb_000208_270 Hb_000208_270 Hb_000007_030--Hb_000208_270 Hb_020141_030 Hb_020141_030 Hb_000007_030--Hb_020141_030 Hb_000029_330 Hb_000029_330 Hb_002835_090--Hb_000029_330 Hb_011900_020 Hb_011900_020 Hb_002835_090--Hb_011900_020 Hb_000359_070 Hb_000359_070 Hb_002835_090--Hb_000359_070 Hb_007595_050 Hb_007595_050 Hb_002835_090--Hb_007595_050 Hb_000069_370 Hb_000069_370 Hb_002835_090--Hb_000069_370
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.464955 0.492135 2.20577 1.13938 0.0184806 0.89118
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0628912 0.0494858 0 0.380395 5.72794

CAGE analysis