Hb_001424_080

Information

Type -
Description -
Location Contig1424: 128797-133005
Sequence    

Annotation

kegg
ID rcu:RCOM_1563920
description serine-threonine protein kinase, plant-type, putative (EC:2.7.10.2)
nr
ID XP_012076384.1
description PREDICTED: probable L-type lectin-domain containing receptor kinase S.5 [Jatropha curcas]
swissprot
ID Q9FG33
description Probable L-type lectin-domain containing receptor kinase S.5 OS=Arabidopsis thaliana GN=LECRKS5 PE=2 SV=1
trembl
ID A0A067LQ36
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10772 PE=3 SV=1
Gene Ontology
ID GO:0004674
description probable l-type lectin-domain containing receptor kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_11278: 129261-129484
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001424_080 0.0 - - PREDICTED: probable L-type lectin-domain containing receptor kinase S.5 [Jatropha curcas]
2 Hb_034342_010 0.0332821664 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001663_100 0.0774477416 - - -
4 Hb_126077_020 0.0788148574 - - Kinase family protein with leucine-rich repeat domain [Theobroma cacao]
5 Hb_000692_180 0.0991250311 - - PREDICTED: uncharacterized protein At1g76070 [Jatropha curcas]
6 Hb_003556_060 0.1085930344 - - -
7 Hb_002400_250 0.1113331016 - - amino acid binding protein, putative [Ricinus communis]
8 Hb_022998_010 0.1183387846 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
9 Hb_001481_030 0.1200945818 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
10 Hb_000720_110 0.1391973738 - - hypothetical protein JCGZ_20628 [Jatropha curcas]
11 Hb_186298_010 0.1432234479 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
12 Hb_001953_130 0.1487818505 - - PREDICTED: uncharacterized protein LOC105648901 [Jatropha curcas]
13 Hb_002716_080 0.1511992068 - - PREDICTED: uncharacterized protein At4g00950 [Jatropha curcas]
14 Hb_000462_020 0.1517178665 - - UDP-glucosyltransferase, putative [Ricinus communis]
15 Hb_000322_200 0.1535424658 transcription factor TF Family: bHLH PREDICTED: putative transcription factor bHLH041 [Jatropha curcas]
16 Hb_151281_010 0.1568873766 - - PREDICTED: LOW QUALITY PROTEIN: probable L-type lectin-domain containing receptor kinase S.5 [Jatropha curcas]
17 Hb_000030_260 0.1577813616 desease resistance Gene Name: NB-ARC leucine-rich repeat containing protein, putative [Ricinus communis]
18 Hb_000512_080 0.1607074694 - - ankyrin repeat-containing protein, putative [Ricinus communis]
19 Hb_000676_030 0.1624419811 - - PREDICTED: probable mitochondrial chaperone BCS1-B [Jatropha curcas]
20 Hb_001838_010 0.163180287 - - hypothetical protein POPTR_0005s18380g [Populus trichocarpa]

Gene co-expression network

sample Hb_001424_080 Hb_001424_080 Hb_034342_010 Hb_034342_010 Hb_001424_080--Hb_034342_010 Hb_001663_100 Hb_001663_100 Hb_001424_080--Hb_001663_100 Hb_126077_020 Hb_126077_020 Hb_001424_080--Hb_126077_020 Hb_000692_180 Hb_000692_180 Hb_001424_080--Hb_000692_180 Hb_003556_060 Hb_003556_060 Hb_001424_080--Hb_003556_060 Hb_002400_250 Hb_002400_250 Hb_001424_080--Hb_002400_250 Hb_034342_010--Hb_126077_020 Hb_034342_010--Hb_003556_060 Hb_034342_010--Hb_001663_100 Hb_022998_010 Hb_022998_010 Hb_034342_010--Hb_022998_010 Hb_034342_010--Hb_000692_180 Hb_001663_100--Hb_000692_180 Hb_001663_100--Hb_022998_010 Hb_001663_100--Hb_126077_020 Hb_000462_020 Hb_000462_020 Hb_001663_100--Hb_000462_020 Hb_126077_020--Hb_003556_060 Hb_126077_020--Hb_022998_010 Hb_186298_010 Hb_186298_010 Hb_126077_020--Hb_186298_010 Hb_000720_110 Hb_000720_110 Hb_000692_180--Hb_000720_110 Hb_000692_180--Hb_000462_020 Hb_000692_180--Hb_022998_010 Hb_003556_060--Hb_022998_010 Hb_017866_020 Hb_017866_020 Hb_003556_060--Hb_017866_020 Hb_000077_460 Hb_000077_460 Hb_003556_060--Hb_000077_460 Hb_002400_250--Hb_000462_020 Hb_015912_010 Hb_015912_010 Hb_002400_250--Hb_015912_010 Hb_002400_250--Hb_001663_100 Hb_004931_060 Hb_004931_060 Hb_002400_250--Hb_004931_060 Hb_002400_250--Hb_186298_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.268576 0.0573766 0.0532246 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.251049 0

CAGE analysis