Hb_001430_090

Information

Type -
Description -
Location Contig1430: 102716-103668
Sequence    

Annotation

kegg
ID rcu:RCOM_1517950
description glutathione s-transferase, putative (EC:4.4.1.5)
nr
ID KDP38795.1
description hypothetical protein JCGZ_05131 [Jatropha curcas]
swissprot
ID P32110
description Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1
trembl
ID A0A067L2S7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05131 PE=3 SV=1
Gene Ontology
ID GO:0004462
description glutathione s-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_11365: 102672-103622
cDNA
(Sanger)
(ID:Location)		 009_L09.ab1: 102672-103614 , 011_H11.ab1: 102672-103603

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001430_090 0.0 - - hypothetical protein JCGZ_05131 [Jatropha curcas]
2 Hb_003398_090 0.0908468579 - - PREDICTED: expansin-A4 [Jatropha curcas]
3 Hb_002900_040 0.1180002992 - - PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like [Populus euphratica]
4 Hb_000393_030 0.1296645401 - - UDP-glucosyltransferase, putative [Ricinus communis]
5 Hb_003913_060 0.1340402928 - - ATP binding protein, putative [Ricinus communis]
6 Hb_000163_010 0.1356089343 - - hypothetical protein JCGZ_13952 [Jatropha curcas]
7 Hb_130563_010 0.1369106966 - - PREDICTED: ABC transporter C family member 3-like isoform X1 [Jatropha curcas]
8 Hb_020805_190 0.1422635899 transcription factor TF Family: HB DNA binding protein, putative [Ricinus communis]
9 Hb_004785_090 0.1429550661 - - hypothetical protein MIMGU_mgv1a018797mg [Erythranthe guttata]
10 Hb_031931_030 0.1478584404 - - lipid binding protein, putative [Ricinus communis]
11 Hb_000120_880 0.1501877663 - - PREDICTED: disease resistance response protein 206-like [Jatropha curcas]
12 Hb_000139_500 0.1508431947 - - PREDICTED: putative uncharacterized protein DDB_G0286901 [Prunus mume]
13 Hb_010761_030 0.153254906 - - cytochrome P450, putative [Ricinus communis]
14 Hb_150084_010 0.1540838947 - - PREDICTED: premnaspirodiene oxygenase-like [Vitis vinifera]
15 Hb_000112_050 0.1580978785 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor ASIL1 [Jatropha curcas]
16 Hb_036069_020 0.1595197457 - - PREDICTED: receptor protein kinase-like protein At4g34220 [Jatropha curcas]
17 Hb_029510_090 0.159944444 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At5g63020 [Jatropha curcas]
18 Hb_000318_060 0.1639234458 - - conserved hypothetical protein [Ricinus communis]
19 Hb_002333_010 0.1647494771 - - hypothetical protein JCGZ_18834 [Jatropha curcas]
20 Hb_004223_180 0.1648135035 - - PREDICTED: auxin-induced protein 15A [Jatropha curcas]

Gene co-expression network

sample Hb_001430_090 Hb_001430_090 Hb_003398_090 Hb_003398_090 Hb_001430_090--Hb_003398_090 Hb_002900_040 Hb_002900_040 Hb_001430_090--Hb_002900_040 Hb_000393_030 Hb_000393_030 Hb_001430_090--Hb_000393_030 Hb_003913_060 Hb_003913_060 Hb_001430_090--Hb_003913_060 Hb_000163_010 Hb_000163_010 Hb_001430_090--Hb_000163_010 Hb_130563_010 Hb_130563_010 Hb_001430_090--Hb_130563_010 Hb_003398_090--Hb_003913_060 Hb_015978_010 Hb_015978_010 Hb_003398_090--Hb_015978_010 Hb_000139_500 Hb_000139_500 Hb_003398_090--Hb_000139_500 Hb_003398_090--Hb_000393_030 Hb_003398_090--Hb_000163_010 Hb_000982_120 Hb_000982_120 Hb_002900_040--Hb_000982_120 Hb_002900_040--Hb_000163_010 Hb_031931_030 Hb_031931_030 Hb_002900_040--Hb_031931_030 Hb_150084_010 Hb_150084_010 Hb_002900_040--Hb_150084_010 Hb_001863_080 Hb_001863_080 Hb_002900_040--Hb_001863_080 Hb_001514_070 Hb_001514_070 Hb_000393_030--Hb_001514_070 Hb_000393_030--Hb_000139_500 Hb_000318_060 Hb_000318_060 Hb_000393_030--Hb_000318_060 Hb_002333_010 Hb_002333_010 Hb_000393_030--Hb_002333_010 Hb_002870_010 Hb_002870_010 Hb_000393_030--Hb_002870_010 Hb_003913_060--Hb_000163_010 Hb_003913_060--Hb_000318_060 Hb_003913_060--Hb_015978_010 Hb_003913_060--Hb_000139_500 Hb_011849_020 Hb_011849_020 Hb_003913_060--Hb_011849_020 Hb_000163_010--Hb_011849_020 Hb_000163_010--Hb_015978_010 Hb_000163_010--Hb_000318_060 Hb_003177_080 Hb_003177_080 Hb_000163_010--Hb_003177_080 Hb_036069_020 Hb_036069_020 Hb_130563_010--Hb_036069_020 Hb_004223_180 Hb_004223_180 Hb_130563_010--Hb_004223_180 Hb_130563_010--Hb_031931_030 Hb_001218_070 Hb_001218_070 Hb_130563_010--Hb_001218_070 Hb_000911_050 Hb_000911_050 Hb_130563_010--Hb_000911_050 Hb_130563_010--Hb_003398_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.855083 5.21722 2.53242 20.3337 0.0515713 0.0567953
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.248444 0 36.202 13.9312

CAGE analysis