Hb_001434_080

Information

Type -
Description -
Location Contig1434: 136122-140925
Sequence    

Annotation

kegg
ID rcu:RCOM_1504870
description Palmitoyltransferase ZDHHC9, putative
nr
ID XP_012090629.1
description PREDICTED: probable protein S-acyltransferase 7 [Jatropha curcas]
swissprot
ID Q0WQK2
description Probable protein S-acyltransferase 7 OS=Arabidopsis thaliana GN=PAT07 PE=1 SV=1
trembl
ID A0A067JRF0
description S-acyltransferase OS=Jatropha curcas GN=JCGZ_26401 PE=3 SV=1
Gene Ontology
ID GO:0008270
description probable protein s-acyltransferase 7

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_11430: 136174-141123
cDNA
(Sanger)
(ID:Location)		 015_L21.ab1: 137332-140784

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001434_080 0.0 - - PREDICTED: probable protein S-acyltransferase 7 [Jatropha curcas]
2 Hb_005663_110 0.0571117819 - - PREDICTED: large proline-rich protein BAG6 isoform X2 [Jatropha curcas]
3 Hb_003544_030 0.0592862699 - - PREDICTED: citrate synthase, glyoxysomal [Jatropha curcas]
4 Hb_001500_140 0.0605538483 - - pelota, putative [Ricinus communis]
5 Hb_011016_050 0.0664347024 - - PREDICTED: probable E3 ubiquitin-protein ligase ARI7 isoform X1 [Jatropha curcas]
6 Hb_002989_020 0.0717948248 - - PREDICTED: uncharacterized protein LOC105630013 isoform X2 [Jatropha curcas]
7 Hb_000327_250 0.0721840831 - - PREDICTED: macrophage erythroblast attacher [Jatropha curcas]
8 Hb_000981_030 0.0725860563 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105640649 [Jatropha curcas]
9 Hb_010142_020 0.0750264946 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000460_080 0.07537354 - - acyl-coenzyme A binding domain containing, putative [Ricinus communis]
11 Hb_003020_100 0.0754351545 - - PREDICTED: transcription initiation factor IIA large subunit [Jatropha curcas]
12 Hb_001114_110 0.0761871829 - - PREDICTED: probable ubiquitin-like-specific protease 2A isoform X1 [Jatropha curcas]
13 Hb_001500_100 0.0771507118 - - conserved hypothetical protein [Ricinus communis]
14 Hb_017387_010 0.077272147 - - PREDICTED: probable serine/threonine-protein kinase At4g35230 [Jatropha curcas]
15 Hb_000477_050 0.0787344799 - - PREDICTED: 26S protease regulatory subunit 8 homolog A [Jatropha curcas]
16 Hb_002728_080 0.0789248108 - - WD-repeat protein, putative [Ricinus communis]
17 Hb_003528_030 0.0790092013 - - PREDICTED: eukaryotic translation initiation factor 3 subunit L-like [Jatropha curcas]
18 Hb_003544_060 0.0790274446 - - hypothetical protein JCGZ_22100 [Jatropha curcas]
19 Hb_000962_030 0.0799645237 - - PREDICTED: metal tolerance protein C2 [Jatropha curcas]
20 Hb_000614_240 0.0800728906 - - PREDICTED: signal recognition particle subunit SRP72 [Jatropha curcas]

Gene co-expression network

sample Hb_001434_080 Hb_001434_080 Hb_005663_110 Hb_005663_110 Hb_001434_080--Hb_005663_110 Hb_003544_030 Hb_003544_030 Hb_001434_080--Hb_003544_030 Hb_001500_140 Hb_001500_140 Hb_001434_080--Hb_001500_140 Hb_011016_050 Hb_011016_050 Hb_001434_080--Hb_011016_050 Hb_002989_020 Hb_002989_020 Hb_001434_080--Hb_002989_020 Hb_000327_250 Hb_000327_250 Hb_001434_080--Hb_000327_250 Hb_005663_110--Hb_003544_030 Hb_004677_050 Hb_004677_050 Hb_005663_110--Hb_004677_050 Hb_000984_170 Hb_000984_170 Hb_005663_110--Hb_000984_170 Hb_005663_110--Hb_000327_250 Hb_039946_050 Hb_039946_050 Hb_005663_110--Hb_039946_050 Hb_003544_030--Hb_000327_250 Hb_016347_010 Hb_016347_010 Hb_003544_030--Hb_016347_010 Hb_006452_120 Hb_006452_120 Hb_003544_030--Hb_006452_120 Hb_017387_010 Hb_017387_010 Hb_003544_030--Hb_017387_010 Hb_001584_120 Hb_001584_120 Hb_001500_140--Hb_001584_120 Hb_010142_020 Hb_010142_020 Hb_001500_140--Hb_010142_020 Hb_093458_040 Hb_093458_040 Hb_001500_140--Hb_093458_040 Hb_001999_310 Hb_001999_310 Hb_001500_140--Hb_001999_310 Hb_000140_290 Hb_000140_290 Hb_001500_140--Hb_000140_290 Hb_000574_450 Hb_000574_450 Hb_001500_140--Hb_000574_450 Hb_000614_240 Hb_000614_240 Hb_011016_050--Hb_000614_240 Hb_000140_210 Hb_000140_210 Hb_011016_050--Hb_000140_210 Hb_009296_040 Hb_009296_040 Hb_011016_050--Hb_009296_040 Hb_004030_080 Hb_004030_080 Hb_011016_050--Hb_004030_080 Hb_011016_050--Hb_010142_020 Hb_000083_120 Hb_000083_120 Hb_011016_050--Hb_000083_120 Hb_000340_530 Hb_000340_530 Hb_002989_020--Hb_000340_530 Hb_011063_050 Hb_011063_050 Hb_002989_020--Hb_011063_050 Hb_002989_020--Hb_010142_020 Hb_002989_020--Hb_093458_040 Hb_000477_050 Hb_000477_050 Hb_002989_020--Hb_000477_050 Hb_001679_050 Hb_001679_050 Hb_002989_020--Hb_001679_050 Hb_000327_250--Hb_016347_010 Hb_004096_110 Hb_004096_110 Hb_000327_250--Hb_004096_110 Hb_021576_010 Hb_021576_010 Hb_000327_250--Hb_021576_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
18.3792 26.1319 20.7197 36.4643 18.3971 23.4911
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.7308 20.3807 21.4249 39.4445 17.9977

CAGE analysis