Hb_001437_240

Information

Type -
Description -
Location Contig1437: 224400-233595
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001437_240 0.0 - - -
2 Hb_004882_020 0.0849052902 - - -
3 Hb_183612_100 0.1148659489 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 22 [Jatropha curcas]
4 Hb_143629_090 0.1173367738 - - PREDICTED: uncharacterized protein LOC105647358 [Jatropha curcas]
5 Hb_002307_090 0.1183824747 - - magnesium transporter CorA-like family protein [Populus trichocarpa]
6 Hb_002936_050 0.1244977597 transcription factor TF Family: ARR-B PREDICTED: two-component response regulator ARR18 isoform X2 [Jatropha curcas]
7 Hb_004800_160 0.1248714634 - - Uncharacterized protein TCM_000403 [Theobroma cacao]
8 Hb_000749_250 0.1273921904 - - PREDICTED: lanC-like protein GCR2 [Jatropha curcas]
9 Hb_163950_010 0.1279380289 - - -
10 Hb_002897_060 0.1283772707 - - PREDICTED: uncharacterized protein LOC105649233 [Jatropha curcas]
11 Hb_001946_320 0.1286608336 - - PREDICTED: F-box/kelch-repeat protein At1g55270-like [Jatropha curcas]
12 Hb_000861_040 0.1318818224 - - PREDICTED: nascent polypeptide-associated complex subunit alpha-like protein 1 [Jatropha curcas]
13 Hb_001232_130 0.1326845891 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor ASIL1-like [Jatropha curcas]
14 Hb_000072_280 0.1338686504 - - PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 2-like [Jatropha curcas]
15 Hb_001478_050 0.1352917795 - - PREDICTED: uncharacterized protein LOC105640307 [Jatropha curcas]
16 Hb_007229_060 0.1393771343 - - PREDICTED: pentatricopeptide repeat-containing protein At2g44880 [Jatropha curcas]
17 Hb_005357_150 0.1397105374 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
18 Hb_001606_070 0.1412572822 - - fimbrin, putative [Ricinus communis]
19 Hb_007245_090 0.1414563878 - - -
20 Hb_003943_030 0.1430404937 - - PREDICTED: pentatricopeptide repeat-containing protein At1g32415, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_001437_240 Hb_001437_240 Hb_004882_020 Hb_004882_020 Hb_001437_240--Hb_004882_020 Hb_183612_100 Hb_183612_100 Hb_001437_240--Hb_183612_100 Hb_143629_090 Hb_143629_090 Hb_001437_240--Hb_143629_090 Hb_002307_090 Hb_002307_090 Hb_001437_240--Hb_002307_090 Hb_002936_050 Hb_002936_050 Hb_001437_240--Hb_002936_050 Hb_004800_160 Hb_004800_160 Hb_001437_240--Hb_004800_160 Hb_000809_040 Hb_000809_040 Hb_004882_020--Hb_000809_040 Hb_001981_090 Hb_001981_090 Hb_004882_020--Hb_001981_090 Hb_008695_190 Hb_008695_190 Hb_004882_020--Hb_008695_190 Hb_001366_220 Hb_001366_220 Hb_004882_020--Hb_001366_220 Hb_000072_280 Hb_000072_280 Hb_004882_020--Hb_000072_280 Hb_003747_030 Hb_003747_030 Hb_183612_100--Hb_003747_030 Hb_008085_040 Hb_008085_040 Hb_183612_100--Hb_008085_040 Hb_152439_020 Hb_152439_020 Hb_183612_100--Hb_152439_020 Hb_000861_040 Hb_000861_040 Hb_183612_100--Hb_000861_040 Hb_004951_040 Hb_004951_040 Hb_183612_100--Hb_004951_040 Hb_183612_100--Hb_004882_020 Hb_000249_130 Hb_000249_130 Hb_143629_090--Hb_000249_130 Hb_143629_090--Hb_004800_160 Hb_143629_090--Hb_152439_020 Hb_024952_010 Hb_024952_010 Hb_143629_090--Hb_024952_010 Hb_003943_030 Hb_003943_030 Hb_143629_090--Hb_003943_030 Hb_001946_320 Hb_001946_320 Hb_002307_090--Hb_001946_320 Hb_001232_130 Hb_001232_130 Hb_002307_090--Hb_001232_130 Hb_007229_060 Hb_007229_060 Hb_002307_090--Hb_007229_060 Hb_002307_090--Hb_000861_040 Hb_005000_290 Hb_005000_290 Hb_002307_090--Hb_005000_290 Hb_002291_030 Hb_002291_030 Hb_002307_090--Hb_002291_030 Hb_042729_010 Hb_042729_010 Hb_002936_050--Hb_042729_010 Hb_000419_040 Hb_000419_040 Hb_002936_050--Hb_000419_040 Hb_000003_840 Hb_000003_840 Hb_002936_050--Hb_000003_840 Hb_012522_030 Hb_012522_030 Hb_002936_050--Hb_012522_030 Hb_001278_050 Hb_001278_050 Hb_002936_050--Hb_001278_050 Hb_002897_060 Hb_002897_060 Hb_002936_050--Hb_002897_060 Hb_004800_160--Hb_000861_040 Hb_005357_150 Hb_005357_150 Hb_004800_160--Hb_005357_150 Hb_000025_480 Hb_000025_480 Hb_004800_160--Hb_000025_480 Hb_010402_010 Hb_010402_010 Hb_004800_160--Hb_010402_010 Hb_000427_030 Hb_000427_030 Hb_004800_160--Hb_000427_030 Hb_004800_160--Hb_001981_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.55725 1.29514 0.259332 0.078013 5.79915 2.78103
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.27394 6.30877 12.4098 1.35339 0.518062

CAGE analysis