Hb_001442_040

Information

Type -
Description -
Location Contig1442: 60177-62304
Sequence    

Annotation

kegg
ID rcu:RCOM_0706770
description peroxisome assembly protein, putative
nr
ID XP_012077212.1
description PREDICTED: peroxisome biogenesis factor 10 isoform X1 [Jatropha curcas]
swissprot
ID Q9SYU4
description Peroxisome biogenesis factor 10 OS=Arabidopsis thaliana GN=PEX10 PE=1 SV=1
trembl
ID A0A067KP14
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07611 PE=4 SV=1
Gene Ontology
ID GO:0005779
description peroxisome biogenesis factor 10

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 051_F12r.ab1: 62929-64263

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001442_040 0.0 - - PREDICTED: peroxisome biogenesis factor 10 isoform X1 [Jatropha curcas]
2 Hb_004963_030 0.0512361049 - - PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial [Jatropha curcas]
3 Hb_003847_130 0.0598458097 - - cytochrome C oxidase assembly protein cox11, putative [Ricinus communis]
4 Hb_012733_030 0.063839815 - - hypothetical protein OsI_15243 [Oryza sativa Indica Group]
5 Hb_002592_060 0.0638767489 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001301_100 0.0640872978 - - transporter, putative [Ricinus communis]
7 Hb_001014_160 0.0706521728 - - hypothetical protein JCGZ_23092 [Jatropha curcas]
8 Hb_004846_220 0.0712835355 - - PREDICTED: probable protein phosphatase 2C 11 isoform X1 [Jatropha curcas]
9 Hb_010710_070 0.0714087275 - - PREDICTED: protein TOC75-3, chloroplastic-like [Populus euphratica]
10 Hb_007632_240 0.0729011389 - - transporter, putative [Ricinus communis]
11 Hb_168978_030 0.0739496971 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 8 [Jatropha curcas]
12 Hb_007426_110 0.0774019437 - - PREDICTED: vacuolar fusion protein CCZ1 homolog isoform X2 [Jatropha curcas]
13 Hb_000617_180 0.0777515928 - - hypothetical protein B456_013G125900 [Gossypium raimondii]
14 Hb_000830_030 0.078090218 - - PREDICTED: uncharacterized protein LOC105644214 [Jatropha curcas]
15 Hb_000028_480 0.0783265131 - - PREDICTED: putative 3,4-dihydroxy-2-butanone kinase [Jatropha curcas]
16 Hb_000138_100 0.0790881727 - - bifunctional purine biosynthesis protein, putative [Ricinus communis]
17 Hb_002496_010 0.0801665429 - - PREDICTED: protein GDAP2 homolog isoform X1 [Jatropha curcas]
18 Hb_002600_150 0.0811196271 - - PREDICTED: uncharacterized protein LOC105646805 isoform X1 [Jatropha curcas]
19 Hb_007645_100 0.0815988676 transcription factor TF Family: MYB-related PREDICTED: uncharacterized protein LOC105640858 isoform X1 [Jatropha curcas]
20 Hb_006483_110 0.0817349257 - - PREDICTED: RNA-binding protein Musashi homolog 1 [Jatropha curcas]

Gene co-expression network

sample Hb_001442_040 Hb_001442_040 Hb_004963_030 Hb_004963_030 Hb_001442_040--Hb_004963_030 Hb_003847_130 Hb_003847_130 Hb_001442_040--Hb_003847_130 Hb_012733_030 Hb_012733_030 Hb_001442_040--Hb_012733_030 Hb_002592_060 Hb_002592_060 Hb_001442_040--Hb_002592_060 Hb_001301_100 Hb_001301_100 Hb_001442_040--Hb_001301_100 Hb_001014_160 Hb_001014_160 Hb_001442_040--Hb_001014_160 Hb_010710_070 Hb_010710_070 Hb_004963_030--Hb_010710_070 Hb_188063_020 Hb_188063_020 Hb_004963_030--Hb_188063_020 Hb_004963_030--Hb_001014_160 Hb_028912_050 Hb_028912_050 Hb_004963_030--Hb_028912_050 Hb_000343_250 Hb_000343_250 Hb_004963_030--Hb_000343_250 Hb_007632_240 Hb_007632_240 Hb_003847_130--Hb_007632_240 Hb_007645_100 Hb_007645_100 Hb_003847_130--Hb_007645_100 Hb_000466_140 Hb_000466_140 Hb_003847_130--Hb_000466_140 Hb_003847_130--Hb_002592_060 Hb_004410_030 Hb_004410_030 Hb_003847_130--Hb_004410_030 Hb_007380_060 Hb_007380_060 Hb_012733_030--Hb_007380_060 Hb_002600_150 Hb_002600_150 Hb_012733_030--Hb_002600_150 Hb_007426_110 Hb_007426_110 Hb_012733_030--Hb_007426_110 Hb_000008_290 Hb_000008_290 Hb_012733_030--Hb_000008_290 Hb_000053_040 Hb_000053_040 Hb_012733_030--Hb_000053_040 Hb_001021_150 Hb_001021_150 Hb_002592_060--Hb_001021_150 Hb_004846_220 Hb_004846_220 Hb_002592_060--Hb_004846_220 Hb_002263_020 Hb_002263_020 Hb_002592_060--Hb_002263_020 Hb_004254_090 Hb_004254_090 Hb_002592_060--Hb_004254_090 Hb_000317_050 Hb_000317_050 Hb_002592_060--Hb_000317_050 Hb_006483_110 Hb_006483_110 Hb_002592_060--Hb_006483_110 Hb_001301_100--Hb_003847_130 Hb_002044_150 Hb_002044_150 Hb_001301_100--Hb_002044_150 Hb_001301_100--Hb_004846_220 Hb_007317_140 Hb_007317_140 Hb_001301_100--Hb_007317_140 Hb_001301_100--Hb_002592_060 Hb_002154_100 Hb_002154_100 Hb_001014_160--Hb_002154_100 Hb_007390_010 Hb_007390_010 Hb_001014_160--Hb_007390_010 Hb_000331_260 Hb_000331_260 Hb_001014_160--Hb_000331_260 Hb_110291_010 Hb_110291_010 Hb_001014_160--Hb_110291_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.89165 4.4361 5.79251 4.95844 7.21309 10.0461
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.8281 5.9329 5.47492 8.05946 8.99161

CAGE analysis