Hb_001446_060

Information

Type -
Description -
Location Contig1446: 89361-91184
Sequence    

Annotation

kegg
ID rcu:RCOM_0853180
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative
nr
ID XP_002517430.1
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
swissprot
ID O04567
description Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana GN=At1g27190 PE=1 SV=1
trembl
ID B9RUI5
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, putative OS=Ricinus communis GN=RCOM_0853180 PE=4 SV=1
Gene Ontology
ID GO:0005886
description probable inactive receptor kinase at1g27190

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001446_060 0.0 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
2 Hb_001898_020 0.098756291 - - PREDICTED: uncharacterized protein LOC105629659 [Jatropha curcas]
3 Hb_005000_090 0.1017918366 - - PREDICTED: venom phosphodiesterase 2 [Jatropha curcas]
4 Hb_001430_100 0.1097497047 - - cytochrome P450, putative [Ricinus communis]
5 Hb_155150_010 0.1132450761 - - kinase, putative [Ricinus communis]
6 Hb_102763_010 0.1166175711 - - PREDICTED: heat shock cognate protein 80 [Jatropha curcas]
7 Hb_000492_080 0.1251297435 - - PREDICTED: probable sucrose-phosphate synthase 1 [Jatropha curcas]
8 Hb_000000_120 0.1272848797 - - hypothetical protein EUGRSUZ_A004731, partial [Eucalyptus grandis]
9 Hb_010381_020 0.1284889128 - - Endosomal P24A protein precursor, putative [Ricinus communis]
10 Hb_000473_120 0.1294431465 - - hypothetical protein JCGZ_16177 [Jatropha curcas]
11 Hb_052117_010 0.129990335 - - kinase, putative [Ricinus communis]
12 Hb_000997_340 0.1326557495 - - CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]
13 Hb_006949_060 0.1332869213 - - PREDICTED: aminopeptidase M1-like [Jatropha curcas]
14 Hb_029748_020 0.1352488031 - - PREDICTED: ent-kaur-16-ene synthase, chloroplastic isoform X1 [Jatropha curcas]
15 Hb_000072_020 0.1355963071 - - PREDICTED: C2 and GRAM domain-containing protein At1g03370 isoform X2 [Jatropha curcas]
16 Hb_036568_010 0.1367652682 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 23 [Jatropha curcas]
17 Hb_003506_020 0.1383330424 - - PREDICTED: uncharacterized protein LOC105125881 isoform X1 [Populus euphratica]
18 Hb_014720_030 0.1385060734 transcription factor TF Family: C2C2-Dof hypothetical protein POPTR_0012s08280g [Populus trichocarpa]
19 Hb_003006_080 0.1389106934 - - PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase-like isoform X1 [Jatropha curcas]
20 Hb_031089_050 0.138935764 - - kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_001446_060 Hb_001446_060 Hb_001898_020 Hb_001898_020 Hb_001446_060--Hb_001898_020 Hb_005000_090 Hb_005000_090 Hb_001446_060--Hb_005000_090 Hb_001430_100 Hb_001430_100 Hb_001446_060--Hb_001430_100 Hb_155150_010 Hb_155150_010 Hb_001446_060--Hb_155150_010 Hb_102763_010 Hb_102763_010 Hb_001446_060--Hb_102763_010 Hb_000492_080 Hb_000492_080 Hb_001446_060--Hb_000492_080 Hb_052117_010 Hb_052117_010 Hb_001898_020--Hb_052117_010 Hb_001522_040 Hb_001522_040 Hb_001898_020--Hb_001522_040 Hb_009745_010 Hb_009745_010 Hb_001898_020--Hb_009745_010 Hb_000950_040 Hb_000950_040 Hb_001898_020--Hb_000950_040 Hb_005016_020 Hb_005016_020 Hb_001898_020--Hb_005016_020 Hb_005000_090--Hb_102763_010 Hb_001366_270 Hb_001366_270 Hb_005000_090--Hb_001366_270 Hb_009476_120 Hb_009476_120 Hb_005000_090--Hb_009476_120 Hb_001998_220 Hb_001998_220 Hb_005000_090--Hb_001998_220 Hb_005000_090--Hb_000492_080 Hb_000674_010 Hb_000674_010 Hb_005000_090--Hb_000674_010 Hb_001430_100--Hb_005000_090 Hb_001430_100--Hb_102763_010 Hb_000227_320 Hb_000227_320 Hb_001430_100--Hb_000227_320 Hb_001951_070 Hb_001951_070 Hb_001430_100--Hb_001951_070 Hb_010381_020 Hb_010381_020 Hb_001430_100--Hb_010381_020 Hb_000757_020 Hb_000757_020 Hb_155150_010--Hb_000757_020 Hb_029748_020 Hb_029748_020 Hb_155150_010--Hb_029748_020 Hb_155150_010--Hb_001898_020 Hb_000321_120 Hb_000321_120 Hb_155150_010--Hb_000321_120 Hb_000438_020 Hb_000438_020 Hb_155150_010--Hb_000438_020 Hb_102763_010--Hb_010381_020 Hb_102763_010--Hb_001998_220 Hb_002311_130 Hb_002311_130 Hb_102763_010--Hb_002311_130 Hb_000019_170 Hb_000019_170 Hb_102763_010--Hb_000019_170 Hb_002805_090 Hb_002805_090 Hb_102763_010--Hb_002805_090 Hb_001269_050 Hb_001269_050 Hb_000492_080--Hb_001269_050 Hb_000492_080--Hb_001998_220 Hb_000445_130 Hb_000445_130 Hb_000492_080--Hb_000445_130 Hb_000492_080--Hb_001366_270 Hb_001341_010 Hb_001341_010 Hb_000492_080--Hb_001341_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.51304 48.9168 13.91 49.8605 8.67908 8.65839
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.47636 2.26294 6.02921 30.6699 37.113

CAGE analysis