Hb_001464_010

Information

Type -
Description -
Location Contig1464: 12730-23826
Sequence    

Annotation

kegg
ID pop:POPTR_0004s02560g
description hypothetical protein
nr
ID XP_011004252.1
description PREDICTED: putative receptor-like protein kinase At4g00960 isoform X1 [Populus euphratica]
swissprot
ID Q8S9L6
description Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1
trembl
ID A0A067JLD8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21286 PE=3 SV=1
Gene Ontology
ID GO:0000166
description receptor-like protein kinase at4g00960 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001464_010 0.0 - - PREDICTED: putative receptor-like protein kinase At4g00960 isoform X1 [Populus euphratica]
2 Hb_007417_020 0.0337588201 - - Reticuline oxidase precursor, putative [Ricinus communis]
3 Hb_135392_010 0.0782295919 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Jatropha curcas]
4 Hb_001134_040 0.0846833582 - - PREDICTED: EG45-like domain containing protein [Jatropha curcas]
5 Hb_004055_180 0.0861853232 - - cell wall invertase [Manihot esculenta]
6 Hb_007491_010 0.0871276754 - - Spotted leaf protein, putative [Ricinus communis]
7 Hb_097908_010 0.0941590344 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 isoform X2 [Jatropha curcas]
8 Hb_000352_080 0.1011947315 - - PREDICTED: lipid transfer-like protein VAS [Jatropha curcas]
9 Hb_004774_060 0.1045761399 - - -
10 Hb_003090_070 0.1068284381 - - PREDICTED: laccase-7 [Jatropha curcas]
11 Hb_029571_010 0.1097121361 - - PREDICTED: polygalacturonase QRT3 [Jatropha curcas]
12 Hb_010697_030 0.1098769083 - - endo-1,4-beta-glucanase, putative [Ricinus communis]
13 Hb_002805_230 0.1110003085 - - PREDICTED: protein TRANSPARENT TESTA 12 isoform X1 [Jatropha curcas]
14 Hb_003237_040 0.114496965 - - Ent-kaurene synthase B, chloroplast precursor, putative [Ricinus communis]
15 Hb_000155_140 0.1157085824 - - o-methyltransferase, putative [Ricinus communis]
16 Hb_058620_010 0.1173242946 - - cytochrome P450, putative [Ricinus communis]
17 Hb_000712_070 0.1235820934 - - conserved hypothetical protein [Ricinus communis]
18 Hb_175968_010 0.1238049976 - - hypothetical protein JCGZ_21281 [Jatropha curcas]
19 Hb_000563_610 0.1267147407 - - PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 [Jatropha curcas]
20 Hb_007483_040 0.1272777305 - - PREDICTED: protein SRG1-like [Jatropha curcas]

Gene co-expression network

sample Hb_001464_010 Hb_001464_010 Hb_007417_020 Hb_007417_020 Hb_001464_010--Hb_007417_020 Hb_135392_010 Hb_135392_010 Hb_001464_010--Hb_135392_010 Hb_001134_040 Hb_001134_040 Hb_001464_010--Hb_001134_040 Hb_004055_180 Hb_004055_180 Hb_001464_010--Hb_004055_180 Hb_007491_010 Hb_007491_010 Hb_001464_010--Hb_007491_010 Hb_097908_010 Hb_097908_010 Hb_001464_010--Hb_097908_010 Hb_007417_020--Hb_135392_010 Hb_007417_020--Hb_001134_040 Hb_007417_020--Hb_007491_010 Hb_003090_070 Hb_003090_070 Hb_007417_020--Hb_003090_070 Hb_002805_230 Hb_002805_230 Hb_007417_020--Hb_002805_230 Hb_135392_010--Hb_007491_010 Hb_135392_010--Hb_001134_040 Hb_058620_010 Hb_058620_010 Hb_135392_010--Hb_058620_010 Hb_004097_080 Hb_004097_080 Hb_135392_010--Hb_004097_080 Hb_001134_040--Hb_002805_230 Hb_001134_040--Hb_058620_010 Hb_001134_040--Hb_003090_070 Hb_000712_070 Hb_000712_070 Hb_001134_040--Hb_000712_070 Hb_004774_060 Hb_004774_060 Hb_004055_180--Hb_004774_060 Hb_004055_180--Hb_097908_010 Hb_000563_610 Hb_000563_610 Hb_004055_180--Hb_000563_610 Hb_175968_010 Hb_175968_010 Hb_004055_180--Hb_175968_010 Hb_004055_180--Hb_007417_020 Hb_003237_040 Hb_003237_040 Hb_007491_010--Hb_003237_040 Hb_004448_030 Hb_004448_030 Hb_007491_010--Hb_004448_030 Hb_007491_010--Hb_004097_080 Hb_097908_010--Hb_004774_060 Hb_097908_010--Hb_175968_010 Hb_000659_010 Hb_000659_010 Hb_097908_010--Hb_000659_010 Hb_097908_010--Hb_007417_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0386272 0.080637 0.0213252 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.21192 0.0368126

CAGE analysis