Hb_001472_150

Information

Type -
Description -
Location Contig1472: 217451-219454
Sequence    

Annotation

kegg
ID rcu:RCOM_1687080
description cytochrome P450, putative (EC:1.14.14.1)
nr
ID XP_012086874.1
description PREDICTED: cytochrome P450 86A7 [Jatropha curcas]
swissprot
ID O80823
description Cytochrome P450 86A8 OS=Arabidopsis thaliana GN=CYP86A8 PE=2 SV=1
trembl
ID A0A067JNG0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20573 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 86a7

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_11936: 219430-219687
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001472_150 0.0 - - PREDICTED: cytochrome P450 86A7 [Jatropha curcas]
2 Hb_006483_040 0.0379463073 - - PREDICTED: uncharacterized protein LOC105639715 [Jatropha curcas]
3 Hb_001232_070 0.0439443098 - - conserved hypothetical protein [Ricinus communis]
4 Hb_002391_340 0.0440395038 - - RNA polymerase II largest subunit [Liriodendron tulipifera]
5 Hb_154038_010 0.0487499796 - - cytochrome P450, putative [Ricinus communis]
6 Hb_064445_020 0.0501400734 - - PREDICTED: serine carboxypeptidase-like 34 [Populus euphratica]
7 Hb_008453_050 0.0555090362 - - PREDICTED: peroxidase 64 [Jatropha curcas]
8 Hb_001437_170 0.0566330125 - - hypothetical protein POPTR_0009s01390g [Populus trichocarpa]
9 Hb_005839_040 0.0573141511 - - hypothetical protein POPTR_0019s08420g [Populus trichocarpa]
10 Hb_001593_040 0.0584833125 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
11 Hb_096907_010 0.0594568301 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
12 Hb_003151_020 0.0613001182 - - Ankyrin repeat family protein, putative [Theobroma cacao]
13 Hb_000329_120 0.0633035765 - - 21 kDa protein precursor, putative [Ricinus communis]
14 Hb_000160_120 0.0649885647 - - conserved hypothetical protein [Ricinus communis]
15 Hb_144550_010 0.0674482177 - - PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Jatropha curcas]
16 Hb_002326_010 0.0676066388 transcription factor TF Family: G2-like hypothetical protein RCOM_1592640 [Ricinus communis]
17 Hb_000115_030 0.0679067304 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 42 [Jatropha curcas]
18 Hb_065774_010 0.0705246162 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-3, chloroplastic [Jatropha curcas]
19 Hb_012098_120 0.0724561504 - - PREDICTED: putative elongation of fatty acids protein DDB_G0272012 [Jatropha curcas]
20 Hb_072771_010 0.0726141033 - - Endo-1,4-beta-xylanase C precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_001472_150 Hb_001472_150 Hb_006483_040 Hb_006483_040 Hb_001472_150--Hb_006483_040 Hb_001232_070 Hb_001232_070 Hb_001472_150--Hb_001232_070 Hb_002391_340 Hb_002391_340 Hb_001472_150--Hb_002391_340 Hb_154038_010 Hb_154038_010 Hb_001472_150--Hb_154038_010 Hb_064445_020 Hb_064445_020 Hb_001472_150--Hb_064445_020 Hb_008453_050 Hb_008453_050 Hb_001472_150--Hb_008453_050 Hb_006483_040--Hb_154038_010 Hb_006483_040--Hb_064445_020 Hb_006483_040--Hb_008453_050 Hb_006483_040--Hb_001232_070 Hb_006483_040--Hb_002391_340 Hb_001232_070--Hb_002391_340 Hb_000329_120 Hb_000329_120 Hb_001232_070--Hb_000329_120 Hb_065774_010 Hb_065774_010 Hb_001232_070--Hb_065774_010 Hb_001437_170 Hb_001437_170 Hb_001232_070--Hb_001437_170 Hb_002391_340--Hb_065774_010 Hb_002391_340--Hb_001437_170 Hb_096907_010 Hb_096907_010 Hb_002391_340--Hb_096907_010 Hb_154038_010--Hb_008453_050 Hb_154038_010--Hb_064445_020 Hb_072771_010 Hb_072771_010 Hb_154038_010--Hb_072771_010 Hb_001345_050 Hb_001345_050 Hb_154038_010--Hb_001345_050 Hb_002326_010 Hb_002326_010 Hb_154038_010--Hb_002326_010 Hb_001593_040 Hb_001593_040 Hb_064445_020--Hb_001593_040 Hb_064445_020--Hb_002326_010 Hb_064445_020--Hb_008453_050 Hb_000224_190 Hb_000224_190 Hb_064445_020--Hb_000224_190 Hb_008453_050--Hb_002326_010 Hb_008453_050--Hb_072771_010 Hb_008453_050--Hb_001345_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.356278 38.1541 66.0382 0.0125313 0.0742169
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0224032 0.0422151 0 121.733

CAGE analysis