Hb_001473_180

Information

Type -
Description -
Location Contig1473: 190930-200844
Sequence    

Annotation

kegg
ID rcu:RCOM_1020350
description glutathione reductase, putative (EC:1.8.1.7)
nr
ID ADE06225.1
description glutathione reductase [Hevea brasiliensis]
swissprot
ID Q43621
description Glutathione reductase, cytosolic OS=Pisum sativum PE=2 SV=1
trembl
ID D5LPR3
description Glutathione reductase OS=Hevea brasiliensis PE=2 SV=1
Gene Ontology
ID GO:0005777
description glutathione cytosolic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12008: 191043-200786 , PASA_asmbl_12010: 194365-194793
cDNA
(Sanger)
(ID:Location)		 012_H24.ab1: 191064-194273

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001473_180 0.0 - - glutathione reductase [Hevea brasiliensis]
2 Hb_000592_030 0.0578019446 - - PREDICTED: uncharacterized protein LOC100853969 isoform X1 [Vitis vinifera]
3 Hb_002600_150 0.0638223715 - - PREDICTED: uncharacterized protein LOC105646805 isoform X1 [Jatropha curcas]
4 Hb_009270_020 0.0656614491 - - PREDICTED: LOW QUALITY PROTEIN: helicase and polymerase-containing protein TEBICHI [Jatropha curcas]
5 Hb_009079_030 0.072039138 - - PREDICTED: general transcription factor IIF subunit 2 [Jatropha curcas]
6 Hb_000617_180 0.0726043187 - - hypothetical protein B456_013G125900 [Gossypium raimondii]
7 Hb_002815_030 0.0727981796 - - hypothetical protein CISIN_1g0095162mg, partial [Citrus sinensis]
8 Hb_002169_050 0.0735573688 - - PREDICTED: inositol 1,3,4-trisphosphate 5/6-kinase 4 [Jatropha curcas]
9 Hb_012733_030 0.0739269759 - - hypothetical protein OsI_15243 [Oryza sativa Indica Group]
10 Hb_000008_290 0.0739493831 - - PREDICTED: protein SAND [Jatropha curcas]
11 Hb_005147_030 0.0762462579 - - hypothetical protein POPTR_0004s23390g [Populus trichocarpa]
12 Hb_003647_130 0.0771588578 - - PREDICTED: uncharacterized protein LOC105646674 [Jatropha curcas]
13 Hb_002044_150 0.077946936 - - PREDICTED: A/G-specific adenine DNA glycosylase isoform X1 [Jatropha curcas]
14 Hb_010174_040 0.0779505665 - - PREDICTED: T-complex protein 1 subunit epsilon [Jatropha curcas]
15 Hb_020378_030 0.0784397837 - - PREDICTED: protein transport protein SEC31 homolog B [Jatropha curcas]
16 Hb_000614_240 0.0791401407 - - PREDICTED: signal recognition particle subunit SRP72 [Jatropha curcas]
17 Hb_000053_040 0.0792774083 - - hypothetical protein CISIN_1g0010392mg, partial [Citrus sinensis]
18 Hb_000130_160 0.07968361 - - PREDICTED: protein DJ-1 homolog B-like [Jatropha curcas]
19 Hb_002471_290 0.080895311 - - PREDICTED: vacuolar fusion protein CCZ1 homolog isoform X1 [Jatropha curcas]
20 Hb_000207_180 0.0812386571 - - PREDICTED: calponin homology domain-containing protein DDB_G0272472 [Jatropha curcas]

Gene co-expression network

sample Hb_001473_180 Hb_001473_180 Hb_000592_030 Hb_000592_030 Hb_001473_180--Hb_000592_030 Hb_002600_150 Hb_002600_150 Hb_001473_180--Hb_002600_150 Hb_009270_020 Hb_009270_020 Hb_001473_180--Hb_009270_020 Hb_009079_030 Hb_009079_030 Hb_001473_180--Hb_009079_030 Hb_000617_180 Hb_000617_180 Hb_001473_180--Hb_000617_180 Hb_002815_030 Hb_002815_030 Hb_001473_180--Hb_002815_030 Hb_000613_050 Hb_000613_050 Hb_000592_030--Hb_000613_050 Hb_020378_030 Hb_020378_030 Hb_000592_030--Hb_020378_030 Hb_000592_030--Hb_002815_030 Hb_000537_050 Hb_000537_050 Hb_000592_030--Hb_000537_050 Hb_001343_040 Hb_001343_040 Hb_000592_030--Hb_001343_040 Hb_000053_040 Hb_000053_040 Hb_002600_150--Hb_000053_040 Hb_012733_030 Hb_012733_030 Hb_002600_150--Hb_012733_030 Hb_001357_020 Hb_001357_020 Hb_002600_150--Hb_001357_020 Hb_000138_100 Hb_000138_100 Hb_002600_150--Hb_000138_100 Hb_013726_090 Hb_013726_090 Hb_002600_150--Hb_013726_090 Hb_001814_030 Hb_001814_030 Hb_009270_020--Hb_001814_030 Hb_000579_230 Hb_000579_230 Hb_009270_020--Hb_000579_230 Hb_000207_180 Hb_000207_180 Hb_009270_020--Hb_000207_180 Hb_007426_110 Hb_007426_110 Hb_009270_020--Hb_007426_110 Hb_000590_050 Hb_000590_050 Hb_009270_020--Hb_000590_050 Hb_000441_120 Hb_000441_120 Hb_009270_020--Hb_000441_120 Hb_003647_130 Hb_003647_130 Hb_009079_030--Hb_003647_130 Hb_006198_120 Hb_006198_120 Hb_009079_030--Hb_006198_120 Hb_003294_070 Hb_003294_070 Hb_009079_030--Hb_003294_070 Hb_002471_290 Hb_002471_290 Hb_009079_030--Hb_002471_290 Hb_003913_070 Hb_003913_070 Hb_009079_030--Hb_003913_070 Hb_000462_060 Hb_000462_060 Hb_000617_180--Hb_000462_060 Hb_000347_070 Hb_000347_070 Hb_000617_180--Hb_000347_070 Hb_002375_010 Hb_002375_010 Hb_000617_180--Hb_002375_010 Hb_004619_030 Hb_004619_030 Hb_000617_180--Hb_004619_030 Hb_168978_030 Hb_168978_030 Hb_000617_180--Hb_168978_030 Hb_000008_290 Hb_000008_290 Hb_000617_180--Hb_000008_290 Hb_002815_030--Hb_001343_040 Hb_002815_030--Hb_000008_290 Hb_002815_030--Hb_000579_230 Hb_012395_140 Hb_012395_140 Hb_002815_030--Hb_012395_140 Hb_000395_070 Hb_000395_070 Hb_002815_030--Hb_000395_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
61.8871 51.7442 51.5852 48.3101 59.3895 68.7488
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
58.2536 37.8767 67.3458 107.339 65.8943

CAGE analysis