Hb_001474_030

Information

Type -
Description -
Location Contig1474: 38907-42586
Sequence    

Annotation

kegg
ID tcc:TCM_043166
description Kinesin like protein
nr
ID XP_012093271.1
description PREDICTED: uncharacterized protein LOC105650916 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LJC4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20059 PE=4 SV=1
Gene Ontology
ID GO:0031966
description kinesin like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12021: 39109-42485
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001474_030 0.0 - - PREDICTED: uncharacterized protein LOC105650916 [Jatropha curcas]
2 Hb_002276_050 0.0770850935 - - PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial [Jatropha curcas]
3 Hb_000740_070 0.0782172543 - - -
4 Hb_073171_080 0.0788763583 - - PREDICTED: MMS19 nucleotide excision repair protein homolog isoform X1 [Jatropha curcas]
5 Hb_000236_280 0.0793148371 - - PREDICTED: coiled-coil domain-containing protein 22 homolog isoform X1 [Jatropha curcas]
6 Hb_002133_030 0.0808157975 - - PREDICTED: diphthamide biosynthesis protein 1 [Jatropha curcas]
7 Hb_001396_290 0.0821837019 - - hypothetical protein B456_005G166600 [Gossypium raimondii]
8 Hb_023020_060 0.0823552857 - - ubiquitin-conjugating enzyme e2S, putative [Ricinus communis]
9 Hb_000504_160 0.0860061404 - - hypothetical protein POPTR_0001s35340g [Populus trichocarpa]
10 Hb_004374_150 0.0894775257 - - PREDICTED: uncharacterized protein LOC105650290 isoform X1 [Jatropha curcas]
11 Hb_000104_080 0.0897758391 - - PREDICTED: WD repeat domain-containing protein 83 [Jatropha curcas]
12 Hb_000685_080 0.0905950456 - - protein binding protein, putative [Ricinus communis]
13 Hb_000343_210 0.090773512 - - ran-binding protein, putative [Ricinus communis]
14 Hb_000640_020 0.0908408948 - - PREDICTED: probable dimethyladenosine transferase [Jatropha curcas]
15 Hb_000120_510 0.0918009353 - - PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 isoform X1 [Jatropha curcas]
16 Hb_003091_010 0.0932555808 - - PREDICTED: uncharacterized protein LOC105131887 [Populus euphratica]
17 Hb_001473_080 0.0937912355 - - peroxisomal 3-keto-acyl-CoA thiolase [Hevea brasiliensis]
18 Hb_009178_020 0.09466073 - - PREDICTED: zinc finger protein 622 [Jatropha curcas]
19 Hb_000107_170 0.0949007854 - - PREDICTED: pre-mRNA-splicing factor CWC25 homolog [Jatropha curcas]
20 Hb_002675_040 0.0950866858 - - ran-binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_001474_030 Hb_001474_030 Hb_002276_050 Hb_002276_050 Hb_001474_030--Hb_002276_050 Hb_000740_070 Hb_000740_070 Hb_001474_030--Hb_000740_070 Hb_073171_080 Hb_073171_080 Hb_001474_030--Hb_073171_080 Hb_000236_280 Hb_000236_280 Hb_001474_030--Hb_000236_280 Hb_002133_030 Hb_002133_030 Hb_001474_030--Hb_002133_030 Hb_001396_290 Hb_001396_290 Hb_001474_030--Hb_001396_290 Hb_002276_050--Hb_073171_080 Hb_033594_020 Hb_033594_020 Hb_002276_050--Hb_033594_020 Hb_002675_040 Hb_002675_040 Hb_002276_050--Hb_002675_040 Hb_002276_050--Hb_000236_280 Hb_000104_080 Hb_000104_080 Hb_002276_050--Hb_000104_080 Hb_003656_160 Hb_003656_160 Hb_000740_070--Hb_003656_160 Hb_005701_040 Hb_005701_040 Hb_000740_070--Hb_005701_040 Hb_001504_150 Hb_001504_150 Hb_000740_070--Hb_001504_150 Hb_004678_020 Hb_004678_020 Hb_000740_070--Hb_004678_020 Hb_007164_020 Hb_007164_020 Hb_000740_070--Hb_007164_020 Hb_000684_420 Hb_000684_420 Hb_073171_080--Hb_000684_420 Hb_004724_360 Hb_004724_360 Hb_073171_080--Hb_004724_360 Hb_000327_310 Hb_000327_310 Hb_073171_080--Hb_000327_310 Hb_073171_080--Hb_000236_280 Hb_073171_080--Hb_001396_290 Hb_002400_180 Hb_002400_180 Hb_073171_080--Hb_002400_180 Hb_004241_070 Hb_004241_070 Hb_000236_280--Hb_004241_070 Hb_000236_280--Hb_000104_080 Hb_000088_200 Hb_000088_200 Hb_000236_280--Hb_000088_200 Hb_004044_020 Hb_004044_020 Hb_000236_280--Hb_004044_020 Hb_004525_100 Hb_004525_100 Hb_000236_280--Hb_004525_100 Hb_023020_060 Hb_023020_060 Hb_002133_030--Hb_023020_060 Hb_001498_030 Hb_001498_030 Hb_002133_030--Hb_001498_030 Hb_003125_060 Hb_003125_060 Hb_002133_030--Hb_003125_060 Hb_002133_030--Hb_004724_360 Hb_002133_030--Hb_000327_310 Hb_000343_210 Hb_000343_210 Hb_002133_030--Hb_000343_210 Hb_000120_510 Hb_000120_510 Hb_001396_290--Hb_000120_510 Hb_004225_130 Hb_004225_130 Hb_001396_290--Hb_004225_130 Hb_002048_090 Hb_002048_090 Hb_001396_290--Hb_002048_090 Hb_000504_160 Hb_000504_160 Hb_001396_290--Hb_000504_160 Hb_006829_090 Hb_006829_090 Hb_001396_290--Hb_006829_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
80.829 39.7347 25.1898 13.2404 77.0016 66.178
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
22.7589 25.4834 16.9887 12.7867 11.8873

CAGE analysis