Hb_001474_040

Information

Type -
Description -
Location Contig1474: 51979-58771
Sequence    

Annotation

kegg
ID pop:POPTR_0008s03870g
description POPTRDRAFT_563734; pleckstrin homology domain-containing family protein
nr
ID XP_012093267.1
description PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 [Jatropha curcas]
swissprot
ID Q8VZF6
description Protein ENHANCED DISEASE RESISTANCE 2-like OS=Arabidopsis thaliana GN=EDR2L PE=2 SV=1
trembl
ID B9HLK5
description Pleckstrin homology domain-containing family protein OS=Populus trichocarpa GN=POPTR_0008s03870g PE=4 SV=2
Gene Ontology
ID GO:0008289
description protein enhanced disease resistance 2-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001474_040 0.0 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 [Jatropha curcas]
2 Hb_010812_110 0.1327161674 - - putative plant disease resistance family protein [Populus trichocarpa]
3 Hb_000281_060 0.1456454334 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
4 Hb_002498_050 0.1563566665 - - PREDICTED: aspartic proteinase-like [Jatropha curcas]
5 Hb_000818_100 0.1640325156 - - PREDICTED: delta(24)-sterol reductase [Jatropha curcas]
6 Hb_000844_030 0.1662965918 - - ent-kaurene oxidase, putative [Ricinus communis]
7 Hb_000226_070 0.1684895884 - - PREDICTED: pyrophosphate-energized vacuolar membrane proton pump [Jatropha curcas]
8 Hb_017014_010 0.1693580121 - - PREDICTED: syntaxin-132-like isoform X1 [Jatropha curcas]
9 Hb_012762_060 0.1719598373 - - Vitellogenic carboxypeptidase, putative [Ricinus communis]
10 Hb_004738_030 0.1737241659 - - Inactive protein kinase [Gossypium arboreum]
11 Hb_002900_100 0.175763607 - - PREDICTED: L-type lectin-domain containing receptor kinase S.4-like [Jatropha curcas]
12 Hb_000889_100 0.1763230005 - - PREDICTED: syntaxin-132-like isoform X2 [Sesamum indicum]
13 Hb_008054_050 0.1778043718 - - PREDICTED: uncharacterized protein LOC101212042 [Cucumis sativus]
14 Hb_145317_010 0.1782014605 - - PREDICTED: transmembrane 9 superfamily member 11 [Jatropha curcas]
15 Hb_010003_010 0.1800208418 - - PREDICTED: uncharacterized protein LOC105630174 isoform X2 [Jatropha curcas]
16 Hb_000077_290 0.1803493574 - - conserved hypothetical protein [Ricinus communis]
17 Hb_008119_030 0.1805603577 - - PREDICTED: peroxidase 63-like [Jatropha curcas]
18 Hb_066514_010 0.1838811993 - - hypothetical protein RCOM_0204720 [Ricinus communis]
19 Hb_003605_040 0.1881706178 - - PREDICTED: somatic embryogenesis receptor kinase 2 isoform X1 [Jatropha curcas]
20 Hb_009247_010 0.1882604905 - - PREDICTED: sulfhydryl oxidase 2 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_001474_040 Hb_001474_040 Hb_010812_110 Hb_010812_110 Hb_001474_040--Hb_010812_110 Hb_000281_060 Hb_000281_060 Hb_001474_040--Hb_000281_060 Hb_002498_050 Hb_002498_050 Hb_001474_040--Hb_002498_050 Hb_000818_100 Hb_000818_100 Hb_001474_040--Hb_000818_100 Hb_000844_030 Hb_000844_030 Hb_001474_040--Hb_000844_030 Hb_000226_070 Hb_000226_070 Hb_001474_040--Hb_000226_070 Hb_010812_110--Hb_000844_030 Hb_026740_020 Hb_026740_020 Hb_010812_110--Hb_026740_020 Hb_010812_110--Hb_000226_070 Hb_014497_040 Hb_014497_040 Hb_010812_110--Hb_014497_040 Hb_005941_030 Hb_005941_030 Hb_010812_110--Hb_005941_030 Hb_001266_070 Hb_001266_070 Hb_000281_060--Hb_001266_070 Hb_000281_060--Hb_002498_050 Hb_024074_020 Hb_024074_020 Hb_000281_060--Hb_024074_020 Hb_017014_010 Hb_017014_010 Hb_000281_060--Hb_017014_010 Hb_034507_040 Hb_034507_040 Hb_000281_060--Hb_034507_040 Hb_000230_180 Hb_000230_180 Hb_002498_050--Hb_000230_180 Hb_028707_080 Hb_028707_080 Hb_002498_050--Hb_028707_080 Hb_002192_030 Hb_002192_030 Hb_002498_050--Hb_002192_030 Hb_009851_050 Hb_009851_050 Hb_002498_050--Hb_009851_050 Hb_000091_060 Hb_000091_060 Hb_002498_050--Hb_000091_060 Hb_000890_230 Hb_000890_230 Hb_002498_050--Hb_000890_230 Hb_029695_050 Hb_029695_050 Hb_000818_100--Hb_029695_050 Hb_009247_010 Hb_009247_010 Hb_000818_100--Hb_009247_010 Hb_009222_070 Hb_009222_070 Hb_000818_100--Hb_009222_070 Hb_000503_020 Hb_000503_020 Hb_000818_100--Hb_000503_020 Hb_000098_050 Hb_000098_050 Hb_000818_100--Hb_000098_050 Hb_000134_120 Hb_000134_120 Hb_000818_100--Hb_000134_120 Hb_000330_020 Hb_000330_020 Hb_000844_030--Hb_000330_020 Hb_004738_030 Hb_004738_030 Hb_000844_030--Hb_004738_030 Hb_012762_060 Hb_012762_060 Hb_000844_030--Hb_012762_060 Hb_000094_190 Hb_000094_190 Hb_000844_030--Hb_000094_190 Hb_000300_230 Hb_000300_230 Hb_000226_070--Hb_000300_230 Hb_002129_020 Hb_002129_020 Hb_000226_070--Hb_002129_020 Hb_000300_520 Hb_000300_520 Hb_000226_070--Hb_000300_520 Hb_002046_150 Hb_002046_150 Hb_000226_070--Hb_002046_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.16169 0.214628 0.289371 1.1102 0.229068 0.343569
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0598977 0.0157104 0.119502 0.0811732 0.199822

CAGE analysis