Hb_001476_140

Information

Type -
Description -
Location Contig1476: 122690-123703
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa008364mg
description hypothetical protein
nr
ID XP_012067713.1
description PREDICTED: uncharacterized protein LOC105630497 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L9U5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15657 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001476_140 0.0 - - PREDICTED: uncharacterized protein LOC105630497 [Jatropha curcas]
2 Hb_048116_010 0.1194917464 - - PREDICTED: exocyst complex component EXO70A1 [Jatropha curcas]
3 Hb_189118_010 0.1210534857 - - PREDICTED: extended synaptotagmin-1 [Cucumis melo]
4 Hb_007192_080 0.1254768559 - - PREDICTED: probable serine/threonine-protein kinase WNK3 isoform X2 [Jatropha curcas]
5 Hb_008511_050 0.1315733472 - - PREDICTED: cyclase-associated protein 1 [Jatropha curcas]
6 Hb_028639_010 0.1335253907 - - transporter, putative [Ricinus communis]
7 Hb_003195_060 0.1356583262 - - PREDICTED: transmembrane protein 184 homolog DDB_G0279555 [Jatropha curcas]
8 Hb_000077_130 0.1383311692 - - PREDICTED: callose synthase 12 [Jatropha curcas]
9 Hb_001691_120 0.1383767039 desease resistance Gene Name: AAA PREDICTED: vesicle-fusing ATPase [Jatropha curcas]
10 Hb_002067_150 0.1395647306 - - PREDICTED: ankyrin repeat protein SKIP35 [Jatropha curcas]
11 Hb_000444_090 0.1401905789 - - conserved hypothetical protein [Ricinus communis]
12 Hb_025814_010 0.1414048053 - - hypothetical protein PRUPE_ppa015585mg [Prunus persica]
13 Hb_000365_020 0.1441004936 - - Vacuolar sorting receptor 1 precursor, putative [Ricinus communis]
14 Hb_000739_220 0.145572765 - - PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [Jatropha curcas]
15 Hb_000086_590 0.1471214385 - - PREDICTED: putative uncharacterized protein At4g01020, chloroplastic [Jatropha curcas]
16 Hb_049675_010 0.1472265261 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 48-like [Jatropha curcas]
17 Hb_010436_020 0.1473366677 - - Dicer-like protein 4 [Morus notabilis]
18 Hb_000926_120 0.1473796533 - - PREDICTED: aspartic proteinase A1-like [Jatropha curcas]
19 Hb_012490_040 0.1478406537 - - pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus communis]
20 Hb_000048_140 0.1479373209 - - PREDICTED: eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X3 [Jatropha curcas]

Gene co-expression network

sample Hb_001476_140 Hb_001476_140 Hb_048116_010 Hb_048116_010 Hb_001476_140--Hb_048116_010 Hb_189118_010 Hb_189118_010 Hb_001476_140--Hb_189118_010 Hb_007192_080 Hb_007192_080 Hb_001476_140--Hb_007192_080 Hb_008511_050 Hb_008511_050 Hb_001476_140--Hb_008511_050 Hb_028639_010 Hb_028639_010 Hb_001476_140--Hb_028639_010 Hb_003195_060 Hb_003195_060 Hb_001476_140--Hb_003195_060 Hb_003988_010 Hb_003988_010 Hb_048116_010--Hb_003988_010 Hb_000031_150 Hb_000031_150 Hb_048116_010--Hb_000031_150 Hb_004137_060 Hb_004137_060 Hb_048116_010--Hb_004137_060 Hb_010417_050 Hb_010417_050 Hb_048116_010--Hb_010417_050 Hb_048116_010--Hb_189118_010 Hb_000086_590 Hb_000086_590 Hb_189118_010--Hb_000086_590 Hb_010710_010 Hb_010710_010 Hb_189118_010--Hb_010710_010 Hb_005399_010 Hb_005399_010 Hb_189118_010--Hb_005399_010 Hb_034271_030 Hb_034271_030 Hb_189118_010--Hb_034271_030 Hb_049675_010 Hb_049675_010 Hb_189118_010--Hb_049675_010 Hb_000230_080 Hb_000230_080 Hb_189118_010--Hb_000230_080 Hb_007192_080--Hb_003195_060 Hb_001866_110 Hb_001866_110 Hb_007192_080--Hb_001866_110 Hb_009535_020 Hb_009535_020 Hb_007192_080--Hb_009535_020 Hb_007192_080--Hb_008511_050 Hb_002200_130 Hb_002200_130 Hb_007192_080--Hb_002200_130 Hb_000014_150 Hb_000014_150 Hb_007192_080--Hb_000014_150 Hb_008511_050--Hb_003195_060 Hb_006332_010 Hb_006332_010 Hb_008511_050--Hb_006332_010 Hb_008511_050--Hb_002200_130 Hb_050455_010 Hb_050455_010 Hb_008511_050--Hb_050455_010 Hb_023344_030 Hb_023344_030 Hb_008511_050--Hb_023344_030 Hb_000048_140 Hb_000048_140 Hb_028639_010--Hb_000048_140 Hb_028639_010--Hb_009535_020 Hb_028639_010--Hb_002200_130 Hb_003090_080 Hb_003090_080 Hb_028639_010--Hb_003090_080 Hb_000600_070 Hb_000600_070 Hb_028639_010--Hb_000600_070 Hb_000173_510 Hb_000173_510 Hb_028639_010--Hb_000173_510 Hb_002609_110 Hb_002609_110 Hb_003195_060--Hb_002609_110 Hb_003195_070 Hb_003195_070 Hb_003195_060--Hb_003195_070 Hb_002811_360 Hb_002811_360 Hb_003195_060--Hb_002811_360 Hb_003195_060--Hb_006332_010 Hb_005754_060 Hb_005754_060 Hb_003195_060--Hb_005754_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
46.8988 27.9302 3.68096 50.5564 107.593 129.332
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
52.5969 22.3684 99.0182 52.1431 28.1572

CAGE analysis