Hb_001477_120

Information

Type -
Description -
Location Contig1477: 87076-93553
Sequence    

Annotation

kegg
ID rcu:RCOM_1171540
description Protein MLO, putative
nr
ID KDP24064.1
description hypothetical protein JCGZ_25721 [Jatropha curcas]
swissprot
ID O80961
description MLO-like protein 12 OS=Arabidopsis thaliana GN=MLO12 PE=2 SV=2
trembl
ID A0A067JWZ5
description MLO-like protein OS=Jatropha curcas GN=MLO PE=3 SV=1
Gene Ontology
ID GO:0016021
description mlo-like protein 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001477_120 0.0 - - hypothetical protein JCGZ_25721 [Jatropha curcas]
2 Hb_001365_040 0.1421030203 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g05700 isoform X2 [Populus euphratica]
3 Hb_169388_010 0.151489508 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
4 Hb_002019_040 0.1549753271 - - hypothetical protein PRUPE_ppb016160mg, partial [Prunus persica]
5 Hb_167020_010 0.1619595718 - - unnamed protein product [Vitis vinifera]
6 Hb_017987_080 0.1642295022 - - Uncharacterized protein TCM_001832 [Theobroma cacao]
7 Hb_001363_010 0.1652990386 - - hypothetical protein CISIN_1g027763mg [Citrus sinensis]
8 Hb_004940_090 0.1688048589 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
9 Hb_002025_370 0.1761773801 - - monooxygenase, putative [Ricinus communis]
10 Hb_001363_030 0.1792845646 - - PREDICTED: UDP-glycosyltransferase 74F2-like [Populus euphratica]
11 Hb_000977_160 0.1833202176 - - Serine-threonine protein kinase, plant-type, putative [Theobroma cacao]
12 Hb_004970_130 0.183413225 - - PREDICTED: uncharacterized protein LOC105633891 [Jatropha curcas]
13 Hb_006353_010 0.183777508 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105634775 [Jatropha curcas]
14 Hb_005396_100 0.1849902439 - - conserved hypothetical protein [Ricinus communis]
15 Hb_005081_090 0.1861725131 - - -
16 Hb_000915_220 0.1882618892 - - Lactoylglutathione lyase / glyoxalase I family protein [Theobroma cacao]
17 Hb_001013_010 0.1930686437 - - cytochrome P450, putative [Ricinus communis]
18 Hb_032651_060 0.1934426373 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
19 Hb_000111_130 0.2001353304 - - PREDICTED: receptor-like protein 12 [Populus euphratica]
20 Hb_001850_010 0.2005193844 - - PREDICTED: cytochrome P450 71B34-like [Jatropha curcas]

Gene co-expression network

sample Hb_001477_120 Hb_001477_120 Hb_001365_040 Hb_001365_040 Hb_001477_120--Hb_001365_040 Hb_169388_010 Hb_169388_010 Hb_001477_120--Hb_169388_010 Hb_002019_040 Hb_002019_040 Hb_001477_120--Hb_002019_040 Hb_167020_010 Hb_167020_010 Hb_001477_120--Hb_167020_010 Hb_017987_080 Hb_017987_080 Hb_001477_120--Hb_017987_080 Hb_001363_010 Hb_001363_010 Hb_001477_120--Hb_001363_010 Hb_001363_030 Hb_001363_030 Hb_001365_040--Hb_001363_030 Hb_000111_130 Hb_000111_130 Hb_001365_040--Hb_000111_130 Hb_001013_010 Hb_001013_010 Hb_001365_040--Hb_001013_010 Hb_000003_620 Hb_000003_620 Hb_001365_040--Hb_000003_620 Hb_002025_370 Hb_002025_370 Hb_001365_040--Hb_002025_370 Hb_009778_030 Hb_009778_030 Hb_001365_040--Hb_009778_030 Hb_018563_040 Hb_018563_040 Hb_169388_010--Hb_018563_040 Hb_003385_090 Hb_003385_090 Hb_169388_010--Hb_003385_090 Hb_032651_060 Hb_032651_060 Hb_169388_010--Hb_032651_060 Hb_004619_010 Hb_004619_010 Hb_169388_010--Hb_004619_010 Hb_169388_010--Hb_001363_010 Hb_001454_160 Hb_001454_160 Hb_169388_010--Hb_001454_160 Hb_002019_040--Hb_002025_370 Hb_004940_090 Hb_004940_090 Hb_002019_040--Hb_004940_090 Hb_067034_010 Hb_067034_010 Hb_002019_040--Hb_067034_010 Hb_006353_010 Hb_006353_010 Hb_002019_040--Hb_006353_010 Hb_000284_060 Hb_000284_060 Hb_002019_040--Hb_000284_060 Hb_005081_090 Hb_005081_090 Hb_167020_010--Hb_005081_090 Hb_004021_120 Hb_004021_120 Hb_167020_010--Hb_004021_120 Hb_000915_220 Hb_000915_220 Hb_167020_010--Hb_000915_220 Hb_002571_050 Hb_002571_050 Hb_167020_010--Hb_002571_050 Hb_129399_010 Hb_129399_010 Hb_167020_010--Hb_129399_010 Hb_017987_080--Hb_169388_010 Hb_017987_080--Hb_002019_040 Hb_004324_410 Hb_004324_410 Hb_017987_080--Hb_004324_410 Hb_002929_100 Hb_002929_100 Hb_017987_080--Hb_002929_100 Hb_017987_080--Hb_001363_010 Hb_005396_100 Hb_005396_100 Hb_001363_010--Hb_005396_100 Hb_000977_160 Hb_000977_160 Hb_001363_010--Hb_000977_160 Hb_000535_030 Hb_000535_030 Hb_001363_010--Hb_000535_030 Hb_001363_010--Hb_003385_090 Hb_001363_010--Hb_032651_060 Hb_012268_010 Hb_012268_010 Hb_001363_010--Hb_012268_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.285443 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0882021 0.0335933

CAGE analysis