Hb_001477_150

Information

Type -
Description -
Location Contig1477: 128606-129980
Sequence    

Annotation

kegg
ID rcu:RCOM_1171370
description o-methyltransferase, putative (EC:2.1.1.146)
nr
ID XP_002517832.1
description o-methyltransferase, putative [Ricinus communis]
swissprot
ID B6VJS4
description Trans-resveratrol di-O-methyltransferase OS=Vitis vinifera GN=ROMT PE=1 SV=2
trembl
ID B9RVR3
description O-methyltransferase, putative OS=Ricinus communis GN=RCOM_1171370 PE=4 SV=1
Gene Ontology
ID GO:0046983
description trans-resveratrol di-o-methyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001477_150 0.0 - - o-methyltransferase, putative [Ricinus communis]
2 Hb_008438_010 0.2208621125 - - PREDICTED: uncharacterized protein LOC104245771 [Nicotiana sylvestris]
3 Hb_003020_170 0.2237792156 - - Mitogen-activated protein kinase kinase kinase, putative [Ricinus communis]
4 Hb_000943_060 0.248071058 - - PREDICTED: uncharacterized protein LOC105635589 [Jatropha curcas]
5 Hb_001951_250 0.2484989271 - - -
6 Hb_000130_230 0.2512903555 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF098-like [Jatropha curcas]
7 Hb_002046_070 0.2714760149 transcription factor TF Family: AUX/IAA PREDICTED: auxin-induced protein 22D-like isoform X1 [Populus euphratica]
8 Hb_004032_260 0.2718052494 - - PREDICTED: uncharacterized protein LOC105635147 [Jatropha curcas]
9 Hb_007157_030 0.2805287588 - - PREDICTED: protein LURP-one-related 6-like [Jatropha curcas]
10 Hb_003777_360 0.2814916062 transcription factor TF Family: ERF AP2 domain-containing transcription factor family protein [Populus trichocarpa]
11 Hb_002067_140 0.2848194164 - - -
12 Hb_007426_050 0.2856636964 transcription factor TF Family: Tify JAZ8 [Hevea brasiliensis]
13 Hb_080749_010 0.2868011202 - - PREDICTED: putative DNA-binding protein ESCAROLA [Populus euphratica]
14 Hb_000892_070 0.2870314844 - - PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Jatropha curcas]
15 Hb_001488_370 0.2896456719 - - Esterase PIR7B, putative [Ricinus communis]
16 Hb_010506_010 0.290083421 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Jatropha curcas]
17 Hb_000563_260 0.2903495516 - - PREDICTED: uncharacterized protein LOC105641750 [Jatropha curcas]
18 Hb_012053_060 0.2999781913 - - PREDICTED: BTB/POZ domain-containing protein At3g44820 isoform X2 [Jatropha curcas]
19 Hb_001123_100 0.3029184412 - - PREDICTED: uncharacterized protein LOC105647337 isoform X1 [Jatropha curcas]
20 Hb_003891_080 0.3038064384 - - hypothetical protein JCGZ_16710 [Jatropha curcas]

Gene co-expression network

sample Hb_001477_150 Hb_001477_150 Hb_008438_010 Hb_008438_010 Hb_001477_150--Hb_008438_010 Hb_003020_170 Hb_003020_170 Hb_001477_150--Hb_003020_170 Hb_000943_060 Hb_000943_060 Hb_001477_150--Hb_000943_060 Hb_001951_250 Hb_001951_250 Hb_001477_150--Hb_001951_250 Hb_000130_230 Hb_000130_230 Hb_001477_150--Hb_000130_230 Hb_002046_070 Hb_002046_070 Hb_001477_150--Hb_002046_070 Hb_007157_030 Hb_007157_030 Hb_008438_010--Hb_007157_030 Hb_012371_010 Hb_012371_010 Hb_008438_010--Hb_012371_010 Hb_002660_060 Hb_002660_060 Hb_008438_010--Hb_002660_060 Hb_008438_010--Hb_002046_070 Hb_003055_170 Hb_003055_170 Hb_008438_010--Hb_003055_170 Hb_007426_050 Hb_007426_050 Hb_003020_170--Hb_007426_050 Hb_001369_600 Hb_001369_600 Hb_003020_170--Hb_001369_600 Hb_000117_100 Hb_000117_100 Hb_003020_170--Hb_000117_100 Hb_001488_370 Hb_001488_370 Hb_003020_170--Hb_001488_370 Hb_000589_160 Hb_000589_160 Hb_003020_170--Hb_000589_160 Hb_091889_010 Hb_091889_010 Hb_000943_060--Hb_091889_010 Hb_011628_020 Hb_011628_020 Hb_000943_060--Hb_011628_020 Hb_010506_010 Hb_010506_010 Hb_000943_060--Hb_010506_010 Hb_026687_010 Hb_026687_010 Hb_000943_060--Hb_026687_010 Hb_002217_460 Hb_002217_460 Hb_000943_060--Hb_002217_460 Hb_001951_250--Hb_000130_230 Hb_000371_070 Hb_000371_070 Hb_001951_250--Hb_000371_070 Hb_003777_360 Hb_003777_360 Hb_001951_250--Hb_003777_360 Hb_001951_250--Hb_007426_050 Hb_002067_140 Hb_002067_140 Hb_001951_250--Hb_002067_140 Hb_000130_230--Hb_003777_360 Hb_003891_080 Hb_003891_080 Hb_000130_230--Hb_003891_080 Hb_001767_050 Hb_001767_050 Hb_000130_230--Hb_001767_050 Hb_000892_070 Hb_000892_070 Hb_000130_230--Hb_000892_070 Hb_004032_260 Hb_004032_260 Hb_002046_070--Hb_004032_260 Hb_012053_060 Hb_012053_060 Hb_002046_070--Hb_012053_060 Hb_006573_180 Hb_006573_180 Hb_002046_070--Hb_006573_180 Hb_023732_040 Hb_023732_040 Hb_002046_070--Hb_023732_040 Hb_000990_060 Hb_000990_060 Hb_002046_070--Hb_000990_060 Hb_000077_060 Hb_000077_060 Hb_002046_070--Hb_000077_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.433262 0 0.279044 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.118983 1.46632 1.45233 0.14992 0

CAGE analysis