Hb_001486_250

Information

Type -
Description -
Location Contig1486: 181127-193205
Sequence    

Annotation

kegg
ID rcu:RCOM_1322050
description hypothetical protein
nr
ID XP_012070422.1
description PREDICTED: uncharacterized protein LOC105632605 [Jatropha curcas]
swissprot
ID Q9P2D0
description Inhibitor of Bruton tyrosine kinase OS=Homo sapiens GN=IBTK PE=1 SV=3
trembl
ID A0A067L5B2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02700 PE=4 SV=1
Gene Ontology
ID GO:0016301
description ankyrin repeat family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12259: 181126-193299 , PASA_asmbl_12261: 191936-192209
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001486_250 0.0 - - PREDICTED: uncharacterized protein LOC105632605 [Jatropha curcas]
2 Hb_000120_640 0.1152338812 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
3 Hb_004218_020 0.1179408443 - - conserved hypothetical protein [Ricinus communis]
4 Hb_006740_030 0.1260230168 - - PREDICTED: calcium uniporter protein 6, mitochondrial-like [Jatropha curcas]
5 Hb_004218_010 0.1262646827 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
6 Hb_001019_100 0.1264743382 - - BnaC02g13240D [Brassica napus]
7 Hb_065525_120 0.1290703068 - - dtdp-glucose 4-6-dehydratase, putative [Ricinus communis]
8 Hb_004123_020 0.1309745201 - - amino acid binding protein, putative [Ricinus communis]
9 Hb_007810_010 0.1320464325 - - PREDICTED: uncharacterized protein LOC105647655 isoform X1 [Jatropha curcas]
10 Hb_001269_620 0.1328338748 - - PREDICTED: magnesium transporter MRS2-1 isoform X1 [Populus euphratica]
11 Hb_001147_050 0.1344259597 - - PREDICTED: probable serine/threonine-protein kinase Cx32, chloroplastic [Jatropha curcas]
12 Hb_010872_070 0.134552082 - - conserved hypothetical protein [Ricinus communis]
13 Hb_003913_130 0.1392771893 - - histone deacetylase 1, 2 ,3, putative [Ricinus communis]
14 Hb_000923_060 0.1394949482 - - PREDICTED: uncharacterized protein LOC105628271 [Jatropha curcas]
15 Hb_004429_020 0.139526934 - - PREDICTED: magnesium transporter MRS2-5 [Jatropha curcas]
16 Hb_004965_110 0.1403585777 - - PREDICTED: folylpolyglutamate synthase [Jatropha curcas]
17 Hb_001014_060 0.1436880934 transcription factor TF Family: SET histone-lysine n-methyltransferase, suvh, putative [Ricinus communis]
18 Hb_001558_080 0.143791234 - - PREDICTED: protein CURVATURE THYLAKOID 1D, chloroplastic isoform X1 [Jatropha curcas]
19 Hb_000140_090 0.1438617394 - - PREDICTED: C-terminal binding protein AN [Jatropha curcas]
20 Hb_000122_190 0.1439392566 - - PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_001486_250 Hb_001486_250 Hb_000120_640 Hb_000120_640 Hb_001486_250--Hb_000120_640 Hb_004218_020 Hb_004218_020 Hb_001486_250--Hb_004218_020 Hb_006740_030 Hb_006740_030 Hb_001486_250--Hb_006740_030 Hb_004218_010 Hb_004218_010 Hb_001486_250--Hb_004218_010 Hb_001019_100 Hb_001019_100 Hb_001486_250--Hb_001019_100 Hb_065525_120 Hb_065525_120 Hb_001486_250--Hb_065525_120 Hb_001357_200 Hb_001357_200 Hb_000120_640--Hb_001357_200 Hb_001014_060 Hb_001014_060 Hb_000120_640--Hb_001014_060 Hb_003913_130 Hb_003913_130 Hb_000120_640--Hb_003913_130 Hb_000025_350 Hb_000025_350 Hb_000120_640--Hb_000025_350 Hb_007533_040 Hb_007533_040 Hb_000120_640--Hb_007533_040 Hb_007810_010 Hb_007810_010 Hb_000120_640--Hb_007810_010 Hb_004218_020--Hb_007810_010 Hb_004218_020--Hb_006740_030 Hb_004218_020--Hb_003913_130 Hb_004218_020--Hb_000120_640 Hb_032717_060 Hb_032717_060 Hb_004218_020--Hb_032717_060 Hb_004218_020--Hb_004218_010 Hb_000140_090 Hb_000140_090 Hb_006740_030--Hb_000140_090 Hb_001541_120 Hb_001541_120 Hb_006740_030--Hb_001541_120 Hb_000928_070 Hb_000928_070 Hb_006740_030--Hb_000928_070 Hb_000811_070 Hb_000811_070 Hb_006740_030--Hb_000811_070 Hb_008421_020 Hb_008421_020 Hb_006740_030--Hb_008421_020 Hb_006740_030--Hb_007533_040 Hb_004218_010--Hb_003913_130 Hb_004965_110 Hb_004965_110 Hb_004218_010--Hb_004965_110 Hb_000926_200 Hb_000926_200 Hb_004218_010--Hb_000926_200 Hb_003266_030 Hb_003266_030 Hb_004218_010--Hb_003266_030 Hb_053709_050 Hb_053709_050 Hb_004218_010--Hb_053709_050 Hb_003124_150 Hb_003124_150 Hb_001019_100--Hb_003124_150 Hb_003360_040 Hb_003360_040 Hb_001019_100--Hb_003360_040 Hb_000920_200 Hb_000920_200 Hb_001019_100--Hb_000920_200 Hb_000309_130 Hb_000309_130 Hb_001019_100--Hb_000309_130 Hb_002119_130 Hb_002119_130 Hb_001019_100--Hb_002119_130 Hb_001019_100--Hb_006740_030 Hb_000032_370 Hb_000032_370 Hb_065525_120--Hb_000032_370 Hb_027298_010 Hb_027298_010 Hb_065525_120--Hb_027298_010 Hb_009780_050 Hb_009780_050 Hb_065525_120--Hb_009780_050 Hb_154038_020 Hb_154038_020 Hb_065525_120--Hb_154038_020 Hb_001671_030 Hb_001671_030 Hb_065525_120--Hb_001671_030 Hb_007441_080 Hb_007441_080 Hb_065525_120--Hb_007441_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.70239 14.8341 24.729 16.1656 3.04631 3.13258
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
12.3454 18.401 21.6082 7.19319 21.7191

CAGE analysis