Hb_001488_160

Information

Type -
Description -
Location Contig1488: 98710-108415
Sequence    

Annotation

kegg
ID rcu:RCOM_0526250
description UDP-glucuronosyltransferase, putative (EC:2.4.1.115)
nr
ID XP_002526117.1
description UDP-glucuronosyltransferase, putative [Ricinus communis]
swissprot
ID Q9ZWJ3
description UDP-glycosyltransferase 85A2 OS=Arabidopsis thaliana GN=UGT85A2 PE=2 SV=1
trembl
ID A0A0E0GU10
description Uncharacterized protein OS=Oryza nivara PE=4 SV=1
Gene Ontology
ID GO:0047213
description udp-glycosyltransferase 83a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12300: 98812-99553
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001488_160 0.0 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
2 Hb_005675_030 0.0615118069 - - PREDICTED: 3-ketoacyl-CoA synthase 6 [Jatropha curcas]
3 Hb_001699_110 0.0698198101 - - PREDICTED: pathogenesis-related protein 5-like [Jatropha curcas]
4 Hb_018487_040 0.0765421392 - - PREDICTED: 3-ketoacyl-CoA synthase 6 [Jatropha curcas]
5 Hb_011537_130 0.0824568884 - - unnamed protein product [Vitis vinifera]
6 Hb_080048_030 0.0842539421 desease resistance Gene Name: NB-ARC Leucine-rich repeat containing protein [Theobroma cacao]
7 Hb_000739_280 0.0865908263 - - alcohol dehydrogenase, putative [Ricinus communis]
8 Hb_003358_030 0.0876235003 - - ankyrin-kinase, putative [Ricinus communis]
9 Hb_000260_520 0.0902683648 - - receptor protein kinase, putative [Ricinus communis]
10 Hb_005483_040 0.0903928386 - - PREDICTED: mechanosensitive ion channel protein 10-like [Jatropha curcas]
11 Hb_002119_150 0.0912923365 - - hypothetical protein POPTR_0008s13870g [Populus trichocarpa]
12 Hb_001104_070 0.0924749104 - - hypothetical protein SORBIDRAFT_10g024640 [Sorghum bicolor]
13 Hb_002329_050 0.0947669474 - - conserved hypothetical protein [Ricinus communis]
14 Hb_011214_080 0.0997604498 - - sucrose synthase 1 [Hevea brasiliensis]
15 Hb_000254_080 0.1007985979 - - PREDICTED: uncharacterized protein LOC105635000 [Jatropha curcas]
16 Hb_000538_110 0.1016364546 - - sucrose synthase 1 [Hevea brasiliensis]
17 Hb_004837_080 0.1020916283 transcription factor TF Family: MYB PREDICTED: transcription factor MYB46 [Jatropha curcas]
18 Hb_006291_050 0.1023194381 - - PREDICTED: polyribonucleotide nucleotidyltransferase 2, mitochondrial isoform X1 [Jatropha curcas]
19 Hb_005062_100 0.1032640414 - - Ferredoxin-2, chloroplast precursor, putative [Ricinus communis]
20 Hb_018202_040 0.1033577204 - - PREDICTED: phosphoenolpyruvate/phosphate translocator 2, chloroplastic-like [Jatropha curcas]

Gene co-expression network

sample Hb_001488_160 Hb_001488_160 Hb_005675_030 Hb_005675_030 Hb_001488_160--Hb_005675_030 Hb_001699_110 Hb_001699_110 Hb_001488_160--Hb_001699_110 Hb_018487_040 Hb_018487_040 Hb_001488_160--Hb_018487_040 Hb_011537_130 Hb_011537_130 Hb_001488_160--Hb_011537_130 Hb_080048_030 Hb_080048_030 Hb_001488_160--Hb_080048_030 Hb_000739_280 Hb_000739_280 Hb_001488_160--Hb_000739_280 Hb_005675_030--Hb_011537_130 Hb_018202_040 Hb_018202_040 Hb_005675_030--Hb_018202_040 Hb_005675_030--Hb_080048_030 Hb_005675_030--Hb_018487_040 Hb_169492_010 Hb_169492_010 Hb_005675_030--Hb_169492_010 Hb_001699_110--Hb_005675_030 Hb_000958_090 Hb_000958_090 Hb_001699_110--Hb_000958_090 Hb_006291_050 Hb_006291_050 Hb_001699_110--Hb_006291_050 Hb_000389_170 Hb_000389_170 Hb_001699_110--Hb_000389_170 Hb_005843_010 Hb_005843_010 Hb_001699_110--Hb_005843_010 Hb_002675_220 Hb_002675_220 Hb_018487_040--Hb_002675_220 Hb_002250_040 Hb_002250_040 Hb_018487_040--Hb_002250_040 Hb_001104_070 Hb_001104_070 Hb_018487_040--Hb_001104_070 Hb_005483_040 Hb_005483_040 Hb_018487_040--Hb_005483_040 Hb_002329_050 Hb_002329_050 Hb_018487_040--Hb_002329_050 Hb_018487_040--Hb_080048_030 Hb_011537_130--Hb_018202_040 Hb_002413_050 Hb_002413_050 Hb_011537_130--Hb_002413_050 Hb_002534_090 Hb_002534_090 Hb_011537_130--Hb_002534_090 Hb_011537_130--Hb_169492_010 Hb_002044_070 Hb_002044_070 Hb_011537_130--Hb_002044_070 Hb_080048_030--Hb_001104_070 Hb_080048_030--Hb_169492_010 Hb_080048_030--Hb_002675_220 Hb_189208_080 Hb_189208_080 Hb_080048_030--Hb_189208_080 Hb_005062_100 Hb_005062_100 Hb_000739_280--Hb_005062_100 Hb_005066_040 Hb_005066_040 Hb_000739_280--Hb_005066_040 Hb_000002_110 Hb_000002_110 Hb_000739_280--Hb_000002_110 Hb_000739_280--Hb_001699_110 Hb_000260_520 Hb_000260_520 Hb_000739_280--Hb_000260_520
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.00764446 0.546524 1.7904 4.02411 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0110263 0.0211037 0.236114 10.5221

CAGE analysis