Hb_001488_310

Information

Type -
Description -
Location Contig1488: 235686-251224
Sequence    

Annotation

kegg
ID pop:POPTR_0017s13040g
description hypothetical protein
nr
ID XP_012084863.1
description PREDICTED: phenolic glucoside malonyltransferase 1-like [Jatropha curcas]
swissprot
ID Q940Z5
description Phenolic glucoside malonyltransferase 1 OS=Arabidopsis thaliana GN=PMAT1 PE=1 SV=1
trembl
ID A0A067JTI5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19955 PE=4 SV=1
Gene Ontology
ID GO:0016747
description phenolic glucoside malonyltransferase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12325: 241667-241914
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001488_310 0.0 - - PREDICTED: phenolic glucoside malonyltransferase 1-like [Jatropha curcas]
2 Hb_053345_010 0.2536456579 - - -
3 Hb_073799_010 0.2841754065 - - conserved hypothetical protein [Ricinus communis]
4 Hb_030784_010 0.2922381349 - - Dehydration-responsive protein RD22 precursor, putative [Ricinus communis]
5 Hb_128473_010 0.2931254024 - - -
6 Hb_013394_100 0.2932337079 - - PREDICTED: uncharacterized protein LOC105135144 [Populus euphratica]
7 Hb_011287_040 0.2993718582 - - PREDICTED: OTU domain-containing protein At3g57810-like isoform X1 [Jatropha curcas]
8 Hb_001518_070 0.3067601013 - - conserved hypothetical protein [Ricinus communis]
9 Hb_001247_030 0.3107460602 - - -
10 Hb_000261_170 0.3136453144 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
11 Hb_182713_020 0.314813171 - - PREDICTED: vesicle-associated membrane protein 727 [Setaria italica]
12 Hb_003551_010 0.3152743179 - - hypothetical protein CISIN_1g030786mg [Citrus sinensis]
13 Hb_004785_050 0.317357701 - - PREDICTED: serine decarboxylase [Jatropha curcas]
14 Hb_011942_010 0.3182010563 - - conserved hypothetical protein [Ricinus communis]
15 Hb_005928_090 0.3182620147 - - PREDICTED: magnesium transporter MRS2-I-like isoform X3 [Jatropha curcas]
16 Hb_001143_230 0.3184705806 - - beta-galactosidase family protein [Populus trichocarpa]
17 Hb_025048_020 0.3194788148 - - cytochrome P450, putative [Ricinus communis]
18 Hb_021888_040 0.3238927348 - - PREDICTED: uncharacterized protein LOC103499290 isoform X2 [Cucumis melo]
19 Hb_008185_020 0.324989194 - - RING-H2 finger protein ATL3J, putative [Ricinus communis]
20 Hb_007210_020 0.3267177504 - - PREDICTED: hexaprenyldihydroxybenzoate methyltransferase, mitochondrial-like [Solanum tuberosum]

Gene co-expression network

sample Hb_001488_310 Hb_001488_310 Hb_053345_010 Hb_053345_010 Hb_001488_310--Hb_053345_010 Hb_073799_010 Hb_073799_010 Hb_001488_310--Hb_073799_010 Hb_030784_010 Hb_030784_010 Hb_001488_310--Hb_030784_010 Hb_128473_010 Hb_128473_010 Hb_001488_310--Hb_128473_010 Hb_013394_100 Hb_013394_100 Hb_001488_310--Hb_013394_100 Hb_011287_040 Hb_011287_040 Hb_001488_310--Hb_011287_040 Hb_158296_010 Hb_158296_010 Hb_053345_010--Hb_158296_010 Hb_001208_020 Hb_001208_020 Hb_053345_010--Hb_001208_020 Hb_053345_010--Hb_073799_010 Hb_000808_120 Hb_000808_120 Hb_053345_010--Hb_000808_120 Hb_010367_020 Hb_010367_020 Hb_053345_010--Hb_010367_020 Hb_002388_010 Hb_002388_010 Hb_073799_010--Hb_002388_010 Hb_182713_020 Hb_182713_020 Hb_073799_010--Hb_182713_020 Hb_011942_010 Hb_011942_010 Hb_073799_010--Hb_011942_010 Hb_073799_010--Hb_128473_010 Hb_073799_010--Hb_013394_100 Hb_073799_010--Hb_011287_040 Hb_005928_090 Hb_005928_090 Hb_030784_010--Hb_005928_090 Hb_000788_050 Hb_000788_050 Hb_030784_010--Hb_000788_050 Hb_030784_010--Hb_011287_040 Hb_002391_090 Hb_002391_090 Hb_030784_010--Hb_002391_090 Hb_030784_010--Hb_073799_010 Hb_000261_170 Hb_000261_170 Hb_128473_010--Hb_000261_170 Hb_000649_340 Hb_000649_340 Hb_128473_010--Hb_000649_340 Hb_000311_040 Hb_000311_040 Hb_128473_010--Hb_000311_040 Hb_008185_020 Hb_008185_020 Hb_128473_010--Hb_008185_020 Hb_000483_400 Hb_000483_400 Hb_128473_010--Hb_000483_400 Hb_013394_100--Hb_182713_020 Hb_000789_150 Hb_000789_150 Hb_013394_100--Hb_000789_150 Hb_099298_010 Hb_099298_010 Hb_013394_100--Hb_099298_010 Hb_002079_040 Hb_002079_040 Hb_013394_100--Hb_002079_040 Hb_011200_010 Hb_011200_010 Hb_013394_100--Hb_011200_010 Hb_108227_010 Hb_108227_010 Hb_013394_100--Hb_108227_010 Hb_011287_040--Hb_182713_020 Hb_001518_070 Hb_001518_070 Hb_011287_040--Hb_001518_070 Hb_011287_040--Hb_008185_020 Hb_000053_030 Hb_000053_030 Hb_011287_040--Hb_000053_030 Hb_011287_040--Hb_013394_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.390626 0.0604726 0.2751 2.15235 0.0579886 0.590389
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.892907 0 0 0.070254

CAGE analysis