Hb_001497_060

Information

Type -
Description -
Location Contig1497: 103686-110271
Sequence    

Annotation

kegg
ID rcu:RCOM_0554440
description acyl-CoA oxidase, putative (EC:1.9.3.1)
nr
ID XP_012079023.1
description PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal-like [Jatropha curcas]
swissprot
ID P0CZ23
description Acyl-coenzyme A oxidase 3, peroxisomal OS=Arabidopsis thaliana GN=ACX3 PE=1 SV=1
trembl
ID A0A067KHP0
description Acyl-coenzyme A oxidase OS=Jatropha curcas GN=JCGZ_12221 PE=3 SV=1
Gene Ontology
ID GO:0005777
description acyl-coenzyme a oxidase peroxisomal-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001497_060 0.0 - - PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal-like [Jatropha curcas]
2 Hb_000334_260 0.0882311477 - - carotenoid cleavage dioxygenase 1 [Manihot esculenta]
3 Hb_075315_010 0.0916118834 - - ornithine aminotransferase [Camellia sinensis]
4 Hb_000723_010 0.0986203312 - - ABC transporter family protein [Hevea brasiliensis]
5 Hb_001160_070 0.1002800633 - - PREDICTED: uncharacterized protein LOC105632163 [Jatropha curcas]
6 Hb_004837_280 0.1035991755 - - PREDICTED: uncharacterized protein LOC105648296 [Jatropha curcas]
7 Hb_013358_050 0.1045606363 - - NADP-dependent glyceraldehyde-3-phosphate dehydrogenase, putative [Ricinus communis]
8 Hb_004450_070 0.1086007475 - - PREDICTED: 2-hydroxyacyl-CoA lyase [Jatropha curcas]
9 Hb_005081_020 0.1087642426 - - PREDICTED: ninja-family protein mc410 [Jatropha curcas]
10 Hb_055062_040 0.1088953344 - - ceramidase, putative [Ricinus communis]
11 Hb_006829_100 0.1089353375 - - conserved hypothetical protein [Ricinus communis]
12 Hb_069619_010 0.1098018863 - - Aspartic proteinase precursor, putative [Ricinus communis]
13 Hb_000130_160 0.1114319633 - - PREDICTED: protein DJ-1 homolog B-like [Jatropha curcas]
14 Hb_002596_060 0.1126174212 - - conserved hypothetical protein [Ricinus communis]
15 Hb_183867_010 0.1137925864 - - PREDICTED: pentatricopeptide repeat-containing protein At1g62930, chloroplastic-like [Populus euphratica]
16 Hb_007747_170 0.114303283 - - PREDICTED: uncharacterized protein At5g41620 [Jatropha curcas]
17 Hb_019840_030 0.1152334459 - - PREDICTED: KH domain-containing protein At4g18375 isoform X2 [Jatropha curcas]
18 Hb_020805_180 0.1155014198 - - PREDICTED: epidermal growth factor receptor substrate 15-like 1 [Jatropha curcas]
19 Hb_001307_240 0.1160946418 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase SUVR2 isoform X2 [Jatropha curcas]
20 Hb_179306_020 0.1172338295 - - PREDICTED: uncharacterized protein LOC105634392 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_001497_060 Hb_001497_060 Hb_000334_260 Hb_000334_260 Hb_001497_060--Hb_000334_260 Hb_075315_010 Hb_075315_010 Hb_001497_060--Hb_075315_010 Hb_000723_010 Hb_000723_010 Hb_001497_060--Hb_000723_010 Hb_001160_070 Hb_001160_070 Hb_001497_060--Hb_001160_070 Hb_004837_280 Hb_004837_280 Hb_001497_060--Hb_004837_280 Hb_013358_050 Hb_013358_050 Hb_001497_060--Hb_013358_050 Hb_002995_040 Hb_002995_040 Hb_000334_260--Hb_002995_040 Hb_000334_260--Hb_001160_070 Hb_007747_170 Hb_007747_170 Hb_000334_260--Hb_007747_170 Hb_001307_240 Hb_001307_240 Hb_000334_260--Hb_001307_240 Hb_002874_090 Hb_002874_090 Hb_000334_260--Hb_002874_090 Hb_083799_010 Hb_083799_010 Hb_075315_010--Hb_083799_010 Hb_005081_020 Hb_005081_020 Hb_075315_010--Hb_005081_020 Hb_039946_050 Hb_039946_050 Hb_075315_010--Hb_039946_050 Hb_004450_070 Hb_004450_070 Hb_075315_010--Hb_004450_070 Hb_075315_010--Hb_007747_170 Hb_001105_160 Hb_001105_160 Hb_075315_010--Hb_001105_160 Hb_069619_010 Hb_069619_010 Hb_000723_010--Hb_069619_010 Hb_000674_010 Hb_000674_010 Hb_000723_010--Hb_000674_010 Hb_003058_200 Hb_003058_200 Hb_000723_010--Hb_003058_200 Hb_000723_010--Hb_075315_010 Hb_020805_180 Hb_020805_180 Hb_000723_010--Hb_020805_180 Hb_001160_070--Hb_002995_040 Hb_001160_070--Hb_083799_010 Hb_001160_070--Hb_001307_240 Hb_002836_100 Hb_002836_100 Hb_001160_070--Hb_002836_100 Hb_000342_050 Hb_000342_050 Hb_004837_280--Hb_000342_050 Hb_001587_030 Hb_001587_030 Hb_004837_280--Hb_001587_030 Hb_002596_060 Hb_002596_060 Hb_004837_280--Hb_002596_060 Hb_107298_010 Hb_107298_010 Hb_004837_280--Hb_107298_010 Hb_004837_280--Hb_001307_240 Hb_001226_130 Hb_001226_130 Hb_004837_280--Hb_001226_130 Hb_013358_050--Hb_004837_280 Hb_183867_010 Hb_183867_010 Hb_013358_050--Hb_183867_010 Hb_022092_010 Hb_022092_010 Hb_013358_050--Hb_022092_010 Hb_132101_010 Hb_132101_010 Hb_013358_050--Hb_132101_010 Hb_013358_050--Hb_000334_260
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.56107 3.44507 3.40198 5.87415 2.36605 4.2501
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.40665 1.1935 2.54126 10.4559 4.65387

CAGE analysis