Hb_001513_020

Information

Type -
Description -
Location Contig1513: 41730-44998
Sequence    

Annotation

kegg
ID cit:102616645
description methionine aminopeptidase 1A-like
nr
ID XP_012083605.1
description PREDICTED: methionine aminopeptidase 1A isoform X1 [Jatropha curcas]
swissprot
ID Q9SLN5
description Methionine aminopeptidase 1A OS=Arabidopsis thaliana GN=MAP1A PE=1 SV=1
trembl
ID A0A067K183
description Methionine aminopeptidase 1 OS=Jatropha curcas GN=JCGZ_14549 PE=3 SV=1
Gene Ontology
ID GO:0022626
description methionine aminopeptidase 1a

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001513_020 0.0 - - PREDICTED: methionine aminopeptidase 1A isoform X1 [Jatropha curcas]
2 Hb_001477_010 0.1431791274 - - PREDICTED: dnaJ homolog subfamily B member 13-like [Cicer arietinum]
3 Hb_001675_060 0.157194266 - - PREDICTED: dynein light chain 1, cytoplasmic-like [Jatropha curcas]
4 Hb_005016_150 0.1619562104 - - -
5 Hb_001712_050 0.1656792446 - - PREDICTED: uncharacterized protein LOC105641944 [Jatropha curcas]
6 Hb_000256_270 0.1660039851 - - PREDICTED: large proline-rich protein bag6-B isoform X1 [Jatropha curcas]
7 Hb_001668_030 0.1734806785 - - conserved hypothetical protein [Ricinus communis]
8 Hb_003813_100 0.1773088641 - - PREDICTED: proteasome subunit beta type-3-A [Cucumis sativus]
9 Hb_002290_060 0.1797929578 - - o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis]
10 Hb_002253_110 0.1826068289 - - cysteine desulfurylase, putative [Ricinus communis]
11 Hb_004669_040 0.185115084 - - ATPase inhibitor, putative [Ricinus communis]
12 Hb_001722_020 0.1861994547 - - -
13 Hb_077219_010 0.1879673126 - - conserved hypothetical protein [Ricinus communis]
14 Hb_144898_010 0.1925937327 - - PREDICTED: 60S ribosomal protein L7-2-like [Jatropha curcas]
15 Hb_001427_180 0.1930403753 - - PREDICTED: F-box/LRR-repeat protein At4g29420 [Jatropha curcas]
16 Hb_000988_050 0.1969857676 - - conserved hypothetical protein [Ricinus communis]
17 Hb_006455_080 0.1970795918 - - PREDICTED: transcription factor GTE6-like isoform X2 [Nelumbo nucifera]
18 Hb_000612_070 0.1975030751 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000213_060 0.1987003334 - - PREDICTED: RRP12-like protein isoform X1 [Jatropha curcas]
20 Hb_001252_170 0.1990655555 desease resistance Gene Name: Exostosin hypothetical protein PRUPE_ppa001357mg [Prunus persica]

Gene co-expression network

sample Hb_001513_020 Hb_001513_020 Hb_001477_010 Hb_001477_010 Hb_001513_020--Hb_001477_010 Hb_001675_060 Hb_001675_060 Hb_001513_020--Hb_001675_060 Hb_005016_150 Hb_005016_150 Hb_001513_020--Hb_005016_150 Hb_001712_050 Hb_001712_050 Hb_001513_020--Hb_001712_050 Hb_000256_270 Hb_000256_270 Hb_001513_020--Hb_000256_270 Hb_001668_030 Hb_001668_030 Hb_001513_020--Hb_001668_030 Hb_001477_010--Hb_000256_270 Hb_118301_010 Hb_118301_010 Hb_001477_010--Hb_118301_010 Hb_001252_170 Hb_001252_170 Hb_001477_010--Hb_001252_170 Hb_002290_060 Hb_002290_060 Hb_001477_010--Hb_002290_060 Hb_002955_010 Hb_002955_010 Hb_001477_010--Hb_002955_010 Hb_012807_080 Hb_012807_080 Hb_001477_010--Hb_012807_080 Hb_001675_060--Hb_005016_150 Hb_003226_170 Hb_003226_170 Hb_001675_060--Hb_003226_170 Hb_000213_060 Hb_000213_060 Hb_001675_060--Hb_000213_060 Hb_001675_060--Hb_001477_010 Hb_001675_060--Hb_000256_270 Hb_005016_150--Hb_000213_060 Hb_005016_150--Hb_001477_010 Hb_181320_010 Hb_181320_010 Hb_005016_150--Hb_181320_010 Hb_005016_150--Hb_003226_170 Hb_005016_150--Hb_000256_270 Hb_005305_060 Hb_005305_060 Hb_001712_050--Hb_005305_060 Hb_002639_070 Hb_002639_070 Hb_001712_050--Hb_002639_070 Hb_001922_040 Hb_001922_040 Hb_001712_050--Hb_001922_040 Hb_071923_010 Hb_071923_010 Hb_001712_050--Hb_071923_010 Hb_000612_070 Hb_000612_070 Hb_001712_050--Hb_000612_070 Hb_000256_270--Hb_002955_010 Hb_000565_020 Hb_000565_020 Hb_000256_270--Hb_000565_020 Hb_023327_030 Hb_023327_030 Hb_000256_270--Hb_023327_030 Hb_113216_010 Hb_113216_010 Hb_000256_270--Hb_113216_010 Hb_000372_040 Hb_000372_040 Hb_000256_270--Hb_000372_040 Hb_002253_110 Hb_002253_110 Hb_001668_030--Hb_002253_110 Hb_004480_070 Hb_004480_070 Hb_001668_030--Hb_004480_070 Hb_001668_030--Hb_001675_060 Hb_001767_020 Hb_001767_020 Hb_001668_030--Hb_001767_020 Hb_004460_020 Hb_004460_020 Hb_001668_030--Hb_004460_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
21.384 2.80042 2.43154 4.84212 70.1731 126.12
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
30.3211 12.0115 12.4208 7.46199 0.994537

CAGE analysis