Hb_001514_120

Information

Type -
Description -
Location Contig1514: 127350-136978
Sequence    

Annotation

kegg
ID vvi:100260801
description cytochrome P450 81E8-like
nr
ID CAN60309.1
description hypothetical protein VITISV_015004 [Vitis vinifera]
swissprot
ID P93147
description Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2
trembl
ID A5AJI9
description Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015004 PE=4 SV=1
Gene Ontology
ID GO:0004497
description cytochrome p450 81e8-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12833: 127133-127888
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001514_120 0.0 - - hypothetical protein VITISV_015004 [Vitis vinifera]
2 Hb_000288_030 0.0705443403 - - PREDICTED: syntaxin-32 [Jatropha curcas]
3 Hb_000928_070 0.0734070995 - - PREDICTED: maltose excess protein 1, chloroplastic-like [Jatropha curcas]
4 Hb_005162_060 0.0797058957 - - PREDICTED: putative septum site-determining protein minD homolog, chloroplastic [Jatropha curcas]
5 Hb_000856_010 0.0817916166 - - PREDICTED: uncharacterized protein LOC105640466 [Jatropha curcas]
6 Hb_012022_040 0.0826125188 - - Protein SIS1, putative [Ricinus communis]
7 Hb_001541_120 0.0849094397 - - hypothetical protein JCGZ_17842 [Jatropha curcas]
8 Hb_008566_030 0.0853942929 - - hypothetical protein POPTR_0013s02780g [Populus trichocarpa]
9 Hb_000436_130 0.0874384514 - - PREDICTED: probable protein phosphatase 2C 60 [Jatropha curcas]
10 Hb_004109_220 0.0877401017 - - PREDICTED: polyadenylate-binding protein-interacting protein 9-like [Populus euphratica]
11 Hb_003768_030 0.0893410344 - - PREDICTED: ribosome biogenesis protein WDR12 homolog isoform X1 [Jatropha curcas]
12 Hb_009803_050 0.08940889 - - PREDICTED: uncharacterized protein LOC105644460 [Jatropha curcas]
13 Hb_004078_040 0.0904045189 - - PREDICTED: alkylated DNA repair protein alkB homolog 8 [Jatropha curcas]
14 Hb_000614_160 0.0946994413 - - PREDICTED: pentatricopeptide repeat-containing protein At3g04130, mitochondrial [Jatropha curcas]
15 Hb_158445_010 0.0961797545 - - PREDICTED: cysteine protease ATG4-like isoform X1 [Jatropha curcas]
16 Hb_003052_050 0.0971467228 - - PREDICTED: LAG1 longevity assurance homolog 3 [Jatropha curcas]
17 Hb_000110_140 0.0977610675 - - soluble inorganic pyrophosphatase [Hevea brasiliensis]
18 Hb_000925_130 0.098353578 transcription factor TF Family: TRAF PREDICTED: BTB/POZ domain-containing protein At3g05675-like isoform X2 [Jatropha curcas]
19 Hb_000116_260 0.0984340724 - - PREDICTED: uncharacterized protein LOC105628572 [Jatropha curcas]
20 Hb_002311_360 0.0990628172 - - PREDICTED: uncharacterized protein LOC105114273 [Populus euphratica]

Gene co-expression network

sample Hb_001514_120 Hb_001514_120 Hb_000288_030 Hb_000288_030 Hb_001514_120--Hb_000288_030 Hb_000928_070 Hb_000928_070 Hb_001514_120--Hb_000928_070 Hb_005162_060 Hb_005162_060 Hb_001514_120--Hb_005162_060 Hb_000856_010 Hb_000856_010 Hb_001514_120--Hb_000856_010 Hb_012022_040 Hb_012022_040 Hb_001514_120--Hb_012022_040 Hb_001541_120 Hb_001541_120 Hb_001514_120--Hb_001541_120 Hb_000288_030--Hb_000928_070 Hb_004109_220 Hb_004109_220 Hb_000288_030--Hb_004109_220 Hb_000003_230 Hb_000003_230 Hb_000288_030--Hb_000003_230 Hb_000925_130 Hb_000925_130 Hb_000288_030--Hb_000925_130 Hb_003582_060 Hb_003582_060 Hb_000288_030--Hb_003582_060 Hb_000288_030--Hb_012022_040 Hb_000928_070--Hb_001541_120 Hb_000928_070--Hb_000856_010 Hb_000928_070--Hb_012022_040 Hb_000928_070--Hb_003582_060 Hb_000140_090 Hb_000140_090 Hb_000928_070--Hb_000140_090 Hb_158445_010 Hb_158445_010 Hb_005162_060--Hb_158445_010 Hb_000327_060 Hb_000327_060 Hb_005162_060--Hb_000327_060 Hb_009803_050 Hb_009803_050 Hb_005162_060--Hb_009803_050 Hb_003038_240 Hb_003038_240 Hb_005162_060--Hb_003038_240 Hb_000424_200 Hb_000424_200 Hb_005162_060--Hb_000424_200 Hb_000856_010--Hb_012022_040 Hb_005054_110 Hb_005054_110 Hb_000856_010--Hb_005054_110 Hb_004078_040 Hb_004078_040 Hb_000856_010--Hb_004078_040 Hb_000221_190 Hb_000221_190 Hb_000856_010--Hb_000221_190 Hb_000359_060 Hb_000359_060 Hb_000856_010--Hb_000359_060 Hb_001278_100 Hb_001278_100 Hb_012022_040--Hb_001278_100 Hb_012022_040--Hb_004109_220 Hb_149985_010 Hb_149985_010 Hb_012022_040--Hb_149985_010 Hb_012022_040--Hb_000221_190 Hb_001766_050 Hb_001766_050 Hb_001541_120--Hb_001766_050 Hb_006740_030 Hb_006740_030 Hb_001541_120--Hb_006740_030 Hb_001541_120--Hb_000140_090 Hb_008421_020 Hb_008421_020 Hb_001541_120--Hb_008421_020 Hb_003124_150 Hb_003124_150 Hb_001541_120--Hb_003124_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.29651 2.18993 2.05128 3.57436 2.04671 1.44393
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.85589 5.14275 4.03523 2.04249 4.02537

CAGE analysis