Hb_001514_160

Information

Type -
Description -
Location Contig1514: 161807-162055
Sequence    

Annotation

kegg
ID tcc:TCM_034761
description hypothetical protein
nr
ID KDP41663.1
description hypothetical protein JCGZ_16070 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L375
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16070 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001514_160 0.0 - - hypothetical protein JCGZ_16070 [Jatropha curcas]
2 Hb_009142_030 0.0019448582 - - UDP-glucosyltransferase, putative [Ricinus communis]
3 Hb_014034_010 0.0047009065 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
4 Hb_055880_010 0.0049525842 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
5 Hb_002890_050 0.0056722106 - - -
6 Hb_001221_120 0.0081347886 - - cytochrome P450, putative [Ricinus communis]
7 Hb_159957_020 0.0283740104 - - -
8 Hb_000159_030 0.0300825128 - - putative glycosyltransferase, partial [Aralia elata]
9 Hb_000967_030 0.0477361386 - - -
10 Hb_039791_010 0.0806147263 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like isoform X2 [Jatropha curcas]
11 Hb_019299_050 0.0875110939 - - -
12 Hb_005625_050 0.1092412135 - - hypothetical protein PRUPE_ppa024499mg, partial [Prunus persica]
13 Hb_007757_090 0.1169906296 - - PREDICTED: uncharacterized protein LOC105793478 [Gossypium raimondii]
14 Hb_006261_010 0.1233611768 - - PREDICTED: uncharacterized protein LOC104110884 [Nicotiana tomentosiformis]
15 Hb_115414_010 0.1405537298 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Jatropha curcas]
16 Hb_001959_280 0.1470471907 - - PREDICTED: uncharacterized protein LOC105638432 [Jatropha curcas]
17 Hb_035726_010 0.1517493809 - - Insulin-degrading enzyme, putative [Ricinus communis]
18 Hb_000946_020 0.1579755073 - - hypothetical protein PRUPE_ppa023262mg [Prunus persica]
19 Hb_018202_060 0.1603997448 - - PREDICTED: germin-like protein subfamily 1 member 13 [Jatropha curcas]
20 Hb_033843_020 0.1623509109 - - lysosomal alpha-mannosidase, putative [Ricinus communis]

Gene co-expression network

sample Hb_001514_160 Hb_001514_160 Hb_009142_030 Hb_009142_030 Hb_001514_160--Hb_009142_030 Hb_014034_010 Hb_014034_010 Hb_001514_160--Hb_014034_010 Hb_055880_010 Hb_055880_010 Hb_001514_160--Hb_055880_010 Hb_002890_050 Hb_002890_050 Hb_001514_160--Hb_002890_050 Hb_001221_120 Hb_001221_120 Hb_001514_160--Hb_001221_120 Hb_159957_020 Hb_159957_020 Hb_001514_160--Hb_159957_020 Hb_009142_030--Hb_055880_010 Hb_009142_030--Hb_014034_010 Hb_009142_030--Hb_002890_050 Hb_009142_030--Hb_001221_120 Hb_009142_030--Hb_159957_020 Hb_014034_010--Hb_002890_050 Hb_014034_010--Hb_001221_120 Hb_014034_010--Hb_055880_010 Hb_014034_010--Hb_159957_020 Hb_055880_010--Hb_002890_050 Hb_055880_010--Hb_001221_120 Hb_055880_010--Hb_159957_020 Hb_002890_050--Hb_001221_120 Hb_002890_050--Hb_159957_020 Hb_001221_120--Hb_159957_020 Hb_000159_030 Hb_000159_030 Hb_159957_020--Hb_000159_030 Hb_000967_030 Hb_000967_030 Hb_159957_020--Hb_000967_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.36276 0.68341

CAGE analysis