Hb_001514_210

Information

Type -
Description -
Location Contig1514: 206793-220214
Sequence    

Annotation

kegg
ID rcu:RCOM_1588370
description cytochrome P450, putative (EC:1.14.13.89)
nr
ID CAN68429.1
description hypothetical protein VITISV_012133 [Vitis vinifera]
swissprot
ID Q9LHA1
description Cytochrome P450 81D11 OS=Arabidopsis thaliana GN=CYP81D11 PE=2 SV=1
trembl
ID A5BY20
description Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012133 PE=4 SV=1
Gene Ontology
ID GO:0005506
description isoflavone 2 -hydroxylase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12842: 206743-208832 , PASA_asmbl_12843: 212317-212457
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001514_210 0.0 - - hypothetical protein VITISV_012133 [Vitis vinifera]
2 Hb_012753_200 0.0923872605 - - hypothetical protein JCGZ_20651 [Jatropha curcas]
3 Hb_000085_230 0.0961517964 - - PREDICTED: probable long-chain-alcohol O-fatty-acyltransferase 5 [Jatropha curcas]
4 Hb_000579_180 0.0964877698 transcription factor TF Family: bZIP PREDICTED: ocs element-binding factor 1-like [Jatropha curcas]
5 Hb_002805_150 0.0980787033 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
6 Hb_002686_390 0.1019177957 - - PREDICTED: uncharacterized protein LOC105647789 [Jatropha curcas]
7 Hb_003031_030 0.1145782653 - - hypothetical protein JCGZ_21288 [Jatropha curcas]
8 Hb_000010_200 0.1161615235 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
9 Hb_006711_020 0.1182549378 - - hypothetical protein JCGZ_07258 [Jatropha curcas]
10 Hb_004447_020 0.1189811876 - - carbohydrate binding protein, putative [Ricinus communis]
11 Hb_003807_020 0.1208126925 - - PREDICTED: subtilisin-like protease SBT2.5 [Jatropha curcas]
12 Hb_009785_010 0.1283668194 - - PREDICTED: uncharacterized protein LOC105648749 [Jatropha curcas]
13 Hb_004574_010 0.128369275 - - Nodulation receptor kinase precursor, putative [Ricinus communis]
14 Hb_001252_040 0.1292658835 - - PREDICTED: wall-associated receptor kinase-like 20 [Jatropha curcas]
15 Hb_001221_480 0.1306717469 - - metal ion binding protein, putative [Ricinus communis]
16 Hb_001355_110 0.1319920187 - - PREDICTED: mitochondrial chaperone BCS1-like isoform X1 [Jatropha curcas]
17 Hb_000657_030 0.1338591056 transcription factor TF Family: bZIP Ocs element-binding factor, putative [Ricinus communis]
18 Hb_004884_200 0.1340628482 - - PREDICTED: ferritin-3, chloroplastic [Jatropha curcas]
19 Hb_000335_050 0.136031499 - - PREDICTED: CASP-like protein 4A1 isoform X1 [Jatropha curcas]
20 Hb_010926_010 0.1360613136 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Jatropha curcas]

Gene co-expression network

sample Hb_001514_210 Hb_001514_210 Hb_012753_200 Hb_012753_200 Hb_001514_210--Hb_012753_200 Hb_000085_230 Hb_000085_230 Hb_001514_210--Hb_000085_230 Hb_000579_180 Hb_000579_180 Hb_001514_210--Hb_000579_180 Hb_002805_150 Hb_002805_150 Hb_001514_210--Hb_002805_150 Hb_002686_390 Hb_002686_390 Hb_001514_210--Hb_002686_390 Hb_003031_030 Hb_003031_030 Hb_001514_210--Hb_003031_030 Hb_012753_200--Hb_002805_150 Hb_012753_200--Hb_000579_180 Hb_003807_020 Hb_003807_020 Hb_012753_200--Hb_003807_020 Hb_002007_140 Hb_002007_140 Hb_012753_200--Hb_002007_140 Hb_012395_070 Hb_012395_070 Hb_012753_200--Hb_012395_070 Hb_001894_040 Hb_001894_040 Hb_000085_230--Hb_001894_040 Hb_000085_230--Hb_000579_180 Hb_000085_230--Hb_012753_200 Hb_000008_080 Hb_000008_080 Hb_000085_230--Hb_000008_080 Hb_000836_390 Hb_000836_390 Hb_000085_230--Hb_000836_390 Hb_000579_180--Hb_003807_020 Hb_010926_010 Hb_010926_010 Hb_000579_180--Hb_010926_010 Hb_012807_060 Hb_012807_060 Hb_000579_180--Hb_012807_060 Hb_000579_180--Hb_001894_040 Hb_002805_150--Hb_012395_070 Hb_002805_150--Hb_003807_020 Hb_002805_150--Hb_003031_030 Hb_002805_150--Hb_000579_180 Hb_000010_200 Hb_000010_200 Hb_002686_390--Hb_000010_200 Hb_000254_040 Hb_000254_040 Hb_002686_390--Hb_000254_040 Hb_006711_020 Hb_006711_020 Hb_002686_390--Hb_006711_020 Hb_006949_030 Hb_006949_030 Hb_002686_390--Hb_006949_030 Hb_004884_200 Hb_004884_200 Hb_002686_390--Hb_004884_200 Hb_001838_050 Hb_001838_050 Hb_003031_030--Hb_001838_050 Hb_004574_010 Hb_004574_010 Hb_003031_030--Hb_004574_010 Hb_000616_050 Hb_000616_050 Hb_003031_030--Hb_000616_050 Hb_003031_030--Hb_012395_070 Hb_003031_030--Hb_012753_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.467248 10.1458 2.82213 2.83254 0.137384 0.0927424
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0618388 0.0583969 0.186615 15.2203 1.87369

CAGE analysis