Hb_001515_040

Information

Type -
Description -
Location Contig1515: 57070-58412
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001515_040 0.0 - - -
2 Hb_020367_010 0.0570137141 - - hypothetical protein PRUPE_ppa004271mg [Prunus persica]
3 Hb_008725_220 0.0846241997 - - PREDICTED: uncharacterized protein LOC105642593 [Jatropha curcas]
4 Hb_000025_490 0.091407209 - - PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Jatropha curcas]
5 Hb_101437_010 0.0919476624 - - PREDICTED: protein P21-like [Jatropha curcas]
6 Hb_179363_010 0.1054755234 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
7 Hb_000433_050 0.1057343059 - - PREDICTED: cell number regulator 1 isoform X1 [Vitis vinifera]
8 Hb_116352_010 0.1163895803 - - kinase, putative [Ricinus communis]
9 Hb_167186_010 0.1237394528 - - cation-transporting atpase plant, putative [Ricinus communis]
10 Hb_112703_010 0.1241309488 - - PREDICTED: cytochrome P450 CYP72A219-like [Prunus mume]
11 Hb_000959_240 0.124891426 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
12 Hb_004032_220 0.1396675897 - - Calmodulin, putative [Ricinus communis]
13 Hb_032966_010 0.139737005 - - receptor serine/threonine kinase, putative [Ricinus communis]
14 Hb_002119_030 0.1400203094 - - PREDICTED: U-box domain-containing protein 21-like [Jatropha curcas]
15 Hb_005054_330 0.1421680337 - - PREDICTED: nematode resistance protein-like HSPRO2 [Jatropha curcas]
16 Hb_008651_010 0.1432056848 - - cytochrome P450, putative [Ricinus communis]
17 Hb_001405_250 0.1444791015 - - PREDICTED: uncharacterized protein LOC105645451 [Jatropha curcas]
18 Hb_003207_230 0.1457393499 transcription factor TF Family: ERF PREDICTED: dehydration-responsive element-binding protein 1B-like [Jatropha curcas]
19 Hb_002192_060 0.1495607901 - - -
20 Hb_048635_010 0.1496022618 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]

Gene co-expression network

sample Hb_001515_040 Hb_001515_040 Hb_020367_010 Hb_020367_010 Hb_001515_040--Hb_020367_010 Hb_008725_220 Hb_008725_220 Hb_001515_040--Hb_008725_220 Hb_000025_490 Hb_000025_490 Hb_001515_040--Hb_000025_490 Hb_101437_010 Hb_101437_010 Hb_001515_040--Hb_101437_010 Hb_179363_010 Hb_179363_010 Hb_001515_040--Hb_179363_010 Hb_000433_050 Hb_000433_050 Hb_001515_040--Hb_000433_050 Hb_116352_010 Hb_116352_010 Hb_020367_010--Hb_116352_010 Hb_020367_010--Hb_101437_010 Hb_048635_010 Hb_048635_010 Hb_020367_010--Hb_048635_010 Hb_002192_060 Hb_002192_060 Hb_020367_010--Hb_002192_060 Hb_000742_050 Hb_000742_050 Hb_020367_010--Hb_000742_050 Hb_000959_240 Hb_000959_240 Hb_008725_220--Hb_000959_240 Hb_008725_220--Hb_000025_490 Hb_005054_330 Hb_005054_330 Hb_008725_220--Hb_005054_330 Hb_167186_010 Hb_167186_010 Hb_008725_220--Hb_167186_010 Hb_008725_220--Hb_101437_010 Hb_002119_030 Hb_002119_030 Hb_000025_490--Hb_002119_030 Hb_000025_490--Hb_000959_240 Hb_000025_490--Hb_167186_010 Hb_000025_490--Hb_101437_010 Hb_101437_010--Hb_000959_240 Hb_101437_010--Hb_000433_050 Hb_008651_010 Hb_008651_010 Hb_179363_010--Hb_008651_010 Hb_112703_010 Hb_112703_010 Hb_179363_010--Hb_112703_010 Hb_179363_010--Hb_000433_050 Hb_032071_010 Hb_032071_010 Hb_179363_010--Hb_032071_010 Hb_002289_180 Hb_002289_180 Hb_179363_010--Hb_002289_180 Hb_000433_050--Hb_008651_010 Hb_000433_050--Hb_000025_490 Hb_000433_050--Hb_112703_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.88501 0.534921 0.0653772 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis