Hb_001515_050

Information

Type -
Description -
Location Contig1515: 62469-63697
Sequence    

Annotation

kegg
ID cit:102617255
description uncharacterized LOC102617255
nr
ID XP_012075337.1
description PREDICTED: uncharacterized protein LOC105636626 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID B9SZ30
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0494170 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12859: 62952-63196
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001515_050 0.0 - - PREDICTED: uncharacterized protein LOC105636626 [Jatropha curcas]
2 Hb_005183_200 0.1060656265 - - EG964 [Manihot glaziovii]
3 Hb_003430_020 0.1261048058 - - PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Jatropha curcas]
4 Hb_000856_240 0.130163669 - - short chain alcohol dehydrogenase, putative [Ricinus communis]
5 Hb_003439_020 0.1415180867 - - PREDICTED: L-type lectin-domain containing receptor kinase IV.1-like [Solanum lycopersicum]
6 Hb_000255_020 0.1427313321 - - PREDICTED: cysteine-rich receptor-like protein kinase 10 [Jatropha curcas]
7 Hb_000045_180 0.1450418703 - - aquaporin PIP1 [Hevea brasiliensis]
8 Hb_001073_060 0.1460040508 - - phosphate transporter 1 [Hevea brasiliensis]
9 Hb_009581_040 0.1467231061 - - hypothetical protein B456_011G052100 [Gossypium raimondii]
10 Hb_000521_210 0.1484050427 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
11 Hb_003439_090 0.1505703817 - - kinase, putative [Ricinus communis]
12 Hb_000907_120 0.1515734681 transcription factor TF Family: G2-like PREDICTED: transcription repressor KAN1-like [Populus euphratica]
13 Hb_134017_010 0.1521353187 - - kinase, putative [Ricinus communis]
14 Hb_000720_210 0.1539956191 - - carbonyl reductase, putative [Ricinus communis]
15 Hb_000152_250 0.1556905351 - - PREDICTED: uncharacterized protein LOC105648569 [Jatropha curcas]
16 Hb_000589_180 0.1559191095 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 9 [Jatropha curcas]
17 Hb_084127_010 0.1578587325 - - UDP-glucosyltransferase, putative [Ricinus communis]
18 Hb_052764_080 0.1590536987 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD5 isoform X1 [Jatropha curcas]
19 Hb_074312_020 0.1608291078 - - cytochrome P450, putative [Ricinus communis]
20 Hb_015473_010 0.1624284964 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]

Gene co-expression network

sample Hb_001515_050 Hb_001515_050 Hb_005183_200 Hb_005183_200 Hb_001515_050--Hb_005183_200 Hb_003430_020 Hb_003430_020 Hb_001515_050--Hb_003430_020 Hb_000856_240 Hb_000856_240 Hb_001515_050--Hb_000856_240 Hb_003439_020 Hb_003439_020 Hb_001515_050--Hb_003439_020 Hb_000255_020 Hb_000255_020 Hb_001515_050--Hb_000255_020 Hb_000045_180 Hb_000045_180 Hb_001515_050--Hb_000045_180 Hb_005183_200--Hb_003430_020 Hb_005183_200--Hb_003439_020 Hb_009581_040 Hb_009581_040 Hb_005183_200--Hb_009581_040 Hb_052764_080 Hb_052764_080 Hb_005183_200--Hb_052764_080 Hb_074312_020 Hb_074312_020 Hb_005183_200--Hb_074312_020 Hb_003430_020--Hb_009581_040 Hb_134017_010 Hb_134017_010 Hb_003430_020--Hb_134017_010 Hb_009581_050 Hb_009581_050 Hb_003430_020--Hb_009581_050 Hb_003439_090 Hb_003439_090 Hb_003430_020--Hb_003439_090 Hb_012807_060 Hb_012807_060 Hb_003430_020--Hb_012807_060 Hb_149056_010 Hb_149056_010 Hb_000856_240--Hb_149056_010 Hb_000856_240--Hb_000255_020 Hb_000521_210 Hb_000521_210 Hb_000856_240--Hb_000521_210 Hb_001073_060 Hb_001073_060 Hb_000856_240--Hb_001073_060 Hb_000579_220 Hb_000579_220 Hb_000856_240--Hb_000579_220 Hb_135811_060 Hb_135811_060 Hb_000856_240--Hb_135811_060 Hb_003439_020--Hb_074312_020 Hb_003439_020--Hb_134017_010 Hb_001862_060 Hb_001862_060 Hb_003439_020--Hb_001862_060 Hb_003439_020--Hb_000255_020 Hb_003439_020--Hb_003430_020 Hb_084127_010 Hb_084127_010 Hb_003439_020--Hb_084127_010 Hb_001838_010 Hb_001838_010 Hb_000255_020--Hb_001838_010 Hb_000255_020--Hb_134017_010 Hb_000255_020--Hb_074312_020 Hb_000255_020--Hb_009581_040 Hb_000077_460 Hb_000077_460 Hb_000045_180--Hb_000077_460 Hb_000045_180--Hb_003439_090 Hb_013914_020 Hb_013914_020 Hb_000045_180--Hb_013914_020 Hb_017866_020 Hb_017866_020 Hb_000045_180--Hb_017866_020 Hb_003938_010 Hb_003938_010 Hb_000045_180--Hb_003938_010 Hb_002007_140 Hb_002007_140 Hb_000045_180--Hb_002007_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.724837 0.0613635 0.284593 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0450138 0 0 0.440434 0.0729022

CAGE analysis