Hb_001519_020

Information

Type -
Description -
Location Contig1519: 14833-17944
Sequence    

Annotation

kegg
ID rcu:RCOM_1743710
description serine/threonine-protein kinase bri1, putative (EC:1.3.1.74)
nr
ID KDP35941.1
description hypothetical protein JCGZ_09913 [Jatropha curcas]
swissprot
ID Q9SHI2
description Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS=Arabidopsis thaliana GN=At1g17230 PE=2 SV=2
trembl
ID A0A067KI84
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09913 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12929: 15658-15917
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001519_020 0.0 - - hypothetical protein JCGZ_09913 [Jatropha curcas]
2 Hb_158235_010 0.1599499529 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
3 Hb_003020_290 0.2208875632 - - hypothetical protein CICLE_v10029104mg [Citrus clementina]
4 Hb_005496_100 0.2258017515 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH85-like [Populus euphratica]
5 Hb_007157_010 0.2425500952 - - -
6 Hb_000757_090 0.2505719387 - - SPla/RYanodine receptor domain-containing protein isoform 3 [Theobroma cacao]
7 Hb_001344_030 0.2562291854 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
8 Hb_172665_010 0.2618161197 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
9 Hb_156924_020 0.2620436145 - - PREDICTED: uncharacterized protein LOC105644346 [Jatropha curcas]
10 Hb_013253_030 0.2663549247 - - PREDICTED: protein argonaute 16 isoform X1 [Jatropha curcas]
11 Hb_186054_010 0.2812025439 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
12 Hb_006494_010 0.2835961186 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
13 Hb_004109_360 0.2837057449 - - PREDICTED: omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1-like [Jatropha curcas]
14 Hb_161207_010 0.2906086536 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
15 Hb_000340_120 0.2914972882 - - PREDICTED: uncharacterized protein LOC103406091 [Malus domestica]
16 Hb_000837_010 0.3008541052 - - PREDICTED: uncharacterized protein LOC104894399 [Beta vulgaris subsp. vulgaris]
17 Hb_000043_100 0.3042348398 - - PREDICTED: uncharacterized protein LOC105797583 [Gossypium raimondii]
18 Hb_104721_010 0.3095114143 - - PREDICTED: uncharacterized protein LOC105763691 [Gossypium raimondii]
19 Hb_112255_010 0.3103290143 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
20 Hb_094852_010 0.3111822308 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]

Gene co-expression network

sample Hb_001519_020 Hb_001519_020 Hb_158235_010 Hb_158235_010 Hb_001519_020--Hb_158235_010 Hb_003020_290 Hb_003020_290 Hb_001519_020--Hb_003020_290 Hb_005496_100 Hb_005496_100 Hb_001519_020--Hb_005496_100 Hb_007157_010 Hb_007157_010 Hb_001519_020--Hb_007157_010 Hb_000757_090 Hb_000757_090 Hb_001519_020--Hb_000757_090 Hb_001344_030 Hb_001344_030 Hb_001519_020--Hb_001344_030 Hb_158235_010--Hb_001344_030 Hb_158235_010--Hb_003020_290 Hb_013253_030 Hb_013253_030 Hb_158235_010--Hb_013253_030 Hb_000043_100 Hb_000043_100 Hb_158235_010--Hb_000043_100 Hb_158235_010--Hb_005496_100 Hb_003020_290--Hb_005496_100 Hb_003020_290--Hb_001344_030 Hb_003020_290--Hb_000757_090 Hb_186054_010 Hb_186054_010 Hb_003020_290--Hb_186054_010 Hb_008191_010 Hb_008191_010 Hb_005496_100--Hb_008191_010 Hb_161207_010 Hb_161207_010 Hb_005496_100--Hb_161207_010 Hb_012218_020 Hb_012218_020 Hb_005496_100--Hb_012218_020 Hb_006452_230 Hb_006452_230 Hb_007157_010--Hb_006452_230 Hb_172665_010 Hb_172665_010 Hb_007157_010--Hb_172665_010 Hb_000331_520 Hb_000331_520 Hb_007157_010--Hb_000331_520 Hb_000837_010 Hb_000837_010 Hb_007157_010--Hb_000837_010 Hb_104721_010 Hb_104721_010 Hb_007157_010--Hb_104721_010 Hb_156924_020 Hb_156924_020 Hb_000757_090--Hb_156924_020 Hb_094852_010 Hb_094852_010 Hb_000757_090--Hb_094852_010 Hb_000757_090--Hb_001344_030 Hb_000757_090--Hb_186054_010 Hb_178654_020 Hb_178654_020 Hb_000757_090--Hb_178654_020 Hb_012938_010 Hb_012938_010 Hb_000757_090--Hb_012938_010 Hb_001344_030--Hb_186054_010 Hb_001344_030--Hb_156924_020 Hb_001344_030--Hb_104721_010 Hb_001344_030--Hb_094852_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.0109914 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0165947 0.0261168 0 0 0.0555848

CAGE analysis