Hb_001550_050

Information

Type -
Description -
Location Contig1550: 144660-146322
Sequence    

Annotation

kegg
ID egr:104421358
description J domain-containing protein spf31
nr
ID XP_010031569.1
description PREDICTED: J domain-containing protein spf31 [Eucalyptus grandis]
swissprot
ID -
description -
trembl
ID A0A059AA48
description Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00577 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001550_050 0.0 - - PREDICTED: J domain-containing protein spf31 [Eucalyptus grandis]
2 Hb_000820_060 0.2593192419 - - -
3 Hb_025311_020 0.2672902082 - - PREDICTED: uncharacterized protein LOC105039527 [Elaeis guineensis]
4 Hb_009615_080 0.2823643794 - - hypothetical protein JCGZ_24461 [Jatropha curcas]
5 Hb_001300_250 0.287072764 - - hypothetical protein JCGZ_22020 [Jatropha curcas]
6 Hb_001488_190 0.3046348956 - - alpha-amylase, putative [Ricinus communis]
7 Hb_001728_120 0.306814825 - - hypothetical protein POPTR_0001s15540g, partial [Populus trichocarpa]
8 Hb_000820_050 0.3164080127 - - hypothetical protein EUGRSUZ_H02626 [Eucalyptus grandis]
9 Hb_001310_090 0.3188303941 - - PREDICTED: BTB/POZ domain-containing protein NPY5 [Jatropha curcas]
10 Hb_006472_080 0.3216026608 - - -
11 Hb_001189_170 0.3278731891 transcription factor TF Family: B3 hypothetical protein RCOM_1340820 [Ricinus communis]
12 Hb_005599_060 0.3300624805 - - PREDICTED: syntaxin-72 isoform X1 [Jatropha curcas]
13 Hb_013691_050 0.3331589016 - - PREDICTED: suppressor of mec-8 and unc-52 protein homolog 1 [Jatropha curcas]
14 Hb_012424_010 0.3353087938 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
15 Hb_000115_010 0.3439218107 - - 5-methyltetrahydrofolate:homocysteine methyltransferase, putative [Ricinus communis]
16 Hb_001287_010 0.3446180444 - - PREDICTED: arginine decarboxylase [Jatropha curcas]
17 Hb_032202_150 0.3491147576 transcription factor TF Family: ARR-B PREDICTED: two-component response regulator ARR14 [Jatropha curcas]
18 Hb_001943_020 0.3495300994 - - PREDICTED: (S)-coclaurine N-methyltransferase-like, partial [Populus euphratica]
19 Hb_001045_110 0.3502508046 transcription factor TF Family: M-type flowering locus C-like protein [Juglans regia]
20 Hb_009707_030 0.3522328538 - - PREDICTED: ankyrin repeat-containing protein At5g02620 [Jatropha curcas]

Gene co-expression network

sample Hb_001550_050 Hb_001550_050 Hb_000820_060 Hb_000820_060 Hb_001550_050--Hb_000820_060 Hb_025311_020 Hb_025311_020 Hb_001550_050--Hb_025311_020 Hb_009615_080 Hb_009615_080 Hb_001550_050--Hb_009615_080 Hb_001300_250 Hb_001300_250 Hb_001550_050--Hb_001300_250 Hb_001488_190 Hb_001488_190 Hb_001550_050--Hb_001488_190 Hb_001728_120 Hb_001728_120 Hb_001550_050--Hb_001728_120 Hb_000820_050 Hb_000820_050 Hb_000820_060--Hb_000820_050 Hb_000115_010 Hb_000115_010 Hb_000820_060--Hb_000115_010 Hb_006472_080 Hb_006472_080 Hb_000820_060--Hb_006472_080 Hb_105328_010 Hb_105328_010 Hb_000820_060--Hb_105328_010 Hb_000032_450 Hb_000032_450 Hb_000820_060--Hb_000032_450 Hb_006268_020 Hb_006268_020 Hb_000820_060--Hb_006268_020 Hb_025311_020--Hb_009615_080 Hb_012424_010 Hb_012424_010 Hb_025311_020--Hb_012424_010 Hb_025311_020--Hb_000820_060 Hb_001045_110 Hb_001045_110 Hb_025311_020--Hb_001045_110 Hb_000190_240 Hb_000190_240 Hb_025311_020--Hb_000190_240 Hb_000296_060 Hb_000296_060 Hb_025311_020--Hb_000296_060 Hb_000876_040 Hb_000876_040 Hb_009615_080--Hb_000876_040 Hb_007125_010 Hb_007125_010 Hb_009615_080--Hb_007125_010 Hb_009615_080--Hb_012424_010 Hb_187513_010 Hb_187513_010 Hb_009615_080--Hb_187513_010 Hb_002513_050 Hb_002513_050 Hb_009615_080--Hb_002513_050 Hb_001300_250--Hb_001728_120 Hb_003073_090 Hb_003073_090 Hb_001300_250--Hb_003073_090 Hb_000834_070 Hb_000834_070 Hb_001300_250--Hb_000834_070 Hb_002073_110 Hb_002073_110 Hb_001300_250--Hb_002073_110 Hb_003197_010 Hb_003197_010 Hb_001300_250--Hb_003197_010 Hb_003164_010 Hb_003164_010 Hb_001300_250--Hb_003164_010 Hb_000454_040 Hb_000454_040 Hb_001488_190--Hb_000454_040 Hb_007534_060 Hb_007534_060 Hb_001488_190--Hb_007534_060 Hb_005622_020 Hb_005622_020 Hb_001488_190--Hb_005622_020 Hb_001488_190--Hb_003197_010 Hb_003813_180 Hb_003813_180 Hb_001488_190--Hb_003813_180 Hb_005470_030 Hb_005470_030 Hb_001488_190--Hb_005470_030 Hb_001728_120--Hb_003164_010 Hb_002045_080 Hb_002045_080 Hb_001728_120--Hb_002045_080 Hb_001728_120--Hb_003073_090 Hb_001728_120--Hb_000834_070 Hb_001587_170 Hb_001587_170 Hb_001728_120--Hb_001587_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.261869 0.133087 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.703425 0.123064 0.25777

CAGE analysis