Hb_001558_040

Information

Type -
Description -
Location Contig1558: 20321-30674
Sequence    

Annotation

kegg
ID pop:POPTR_0007s14350g
description POPTRDRAFT_219715; hypothetical protein
nr
ID XP_012081654.1
description PREDICTED: GPI ethanolamine phosphate transferase 2 [Jatropha curcas]
swissprot
ID Q758B8
description GPI ethanolamine phosphate transferase 2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=LAS21 PE=3 SV=2
trembl
ID A0A067K0X3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18692 PE=4 SV=1
Gene Ontology
ID GO:0003824
description gpi ethanolamine phosphate transferase 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_13511: 20627-21437 , PASA_asmbl_13512: 20921-21269 , PASA_asmbl_13513: 21444-22616 , PASA_asmbl_13514: 23375-27005 , PASA_asmbl_13515: 27748-29142 , PASA_asmbl_13516: 29469-30629
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001558_040 0.0 - - PREDICTED: GPI ethanolamine phosphate transferase 2 [Jatropha curcas]
2 Hb_001307_240 0.0666361191 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase SUVR2 isoform X2 [Jatropha curcas]
3 Hb_002007_260 0.0688906236 - - beta-mannosidase, putative [Ricinus communis]
4 Hb_000579_130 0.0734925581 - - ubiquitin-protein ligase, putative [Ricinus communis]
5 Hb_001085_080 0.0765236573 - - eukaryotic translation elongation factor 1-alpha [Hevea brasiliensis]
6 Hb_000020_160 0.0797725955 - - PREDICTED: E3 ubiquitin-protein ligase RING1-like [Gossypium raimondii]
7 Hb_158845_060 0.0824552847 - - PREDICTED: nudix hydrolase 3 isoform X1 [Jatropha curcas]
8 Hb_002995_040 0.0827947865 - - PREDICTED: probable serine/threonine-protein kinase dyrk1 isoform X1 [Jatropha curcas]
9 Hb_001159_030 0.0844765531 - - PREDICTED: probable protein S-acyltransferase 14 [Jatropha curcas]
10 Hb_000580_050 0.0855772823 - - -
11 Hb_001246_130 0.0864401234 - - PREDICTED: NAD-dependent malic enzyme 62 kDa isoform, mitochondrial [Jatropha curcas]
12 Hb_010042_030 0.0865260119 - - PREDICTED: UDP-N-acetylglucosamine diphosphorylase 1 [Jatropha curcas]
13 Hb_044486_020 0.0875010455 - - CASTOR protein [Glycine max]
14 Hb_001103_090 0.0900427968 - - PREDICTED: patellin-3 [Populus euphratica]
15 Hb_016461_020 0.0903907132 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000588_080 0.0906915956 - - PREDICTED: uncharacterized protein LOC105638459 [Jatropha curcas]
17 Hb_024650_080 0.0924163708 - - PREDICTED: BTB/POZ domain-containing protein At3g09030 [Jatropha curcas]
18 Hb_004544_040 0.0926902281 - - hypothetical protein PHAVU_010G103000g [Phaseolus vulgaris]
19 Hb_021977_010 0.0932388946 - - PREDICTED: leukotriene A-4 hydrolase homolog [Jatropha curcas]
20 Hb_007137_050 0.0936070542 - - Uncharacterized protein isoform 1 [Theobroma cacao]

Gene co-expression network

sample Hb_001558_040 Hb_001558_040 Hb_001307_240 Hb_001307_240 Hb_001558_040--Hb_001307_240 Hb_002007_260 Hb_002007_260 Hb_001558_040--Hb_002007_260 Hb_000579_130 Hb_000579_130 Hb_001558_040--Hb_000579_130 Hb_001085_080 Hb_001085_080 Hb_001558_040--Hb_001085_080 Hb_000020_160 Hb_000020_160 Hb_001558_040--Hb_000020_160 Hb_158845_060 Hb_158845_060 Hb_001558_040--Hb_158845_060 Hb_004837_280 Hb_004837_280 Hb_001307_240--Hb_004837_280 Hb_001307_240--Hb_002007_260 Hb_001552_030 Hb_001552_030 Hb_001307_240--Hb_001552_030 Hb_001085_290 Hb_001085_290 Hb_001307_240--Hb_001085_290 Hb_000017_230 Hb_000017_230 Hb_001307_240--Hb_000017_230 Hb_001246_130 Hb_001246_130 Hb_002007_260--Hb_001246_130 Hb_010042_030 Hb_010042_030 Hb_002007_260--Hb_010042_030 Hb_002007_260--Hb_001085_290 Hb_001159_030 Hb_001159_030 Hb_002007_260--Hb_001159_030 Hb_030982_010 Hb_030982_010 Hb_002007_260--Hb_030982_010 Hb_000579_130--Hb_001085_080 Hb_000579_130--Hb_010042_030 Hb_016172_030 Hb_016172_030 Hb_000579_130--Hb_016172_030 Hb_007137_050 Hb_007137_050 Hb_000579_130--Hb_007137_050 Hb_000579_130--Hb_002007_260 Hb_001097_040 Hb_001097_040 Hb_001085_080--Hb_001097_040 Hb_001085_080--Hb_158845_060 Hb_002739_120 Hb_002739_120 Hb_001085_080--Hb_002739_120 Hb_001811_170 Hb_001811_170 Hb_001085_080--Hb_001811_170 Hb_000358_100 Hb_000358_100 Hb_000020_160--Hb_000358_100 Hb_000358_220 Hb_000358_220 Hb_000020_160--Hb_000358_220 Hb_044486_020 Hb_044486_020 Hb_000020_160--Hb_044486_020 Hb_024650_080 Hb_024650_080 Hb_000020_160--Hb_024650_080 Hb_000172_340 Hb_000172_340 Hb_000020_160--Hb_000172_340 Hb_170077_010 Hb_170077_010 Hb_000020_160--Hb_170077_010 Hb_003964_110 Hb_003964_110 Hb_158845_060--Hb_003964_110 Hb_000599_360 Hb_000599_360 Hb_158845_060--Hb_000599_360 Hb_000297_030 Hb_000297_030 Hb_158845_060--Hb_000297_030 Hb_080147_050 Hb_080147_050 Hb_158845_060--Hb_080147_050 Hb_021977_010 Hb_021977_010 Hb_158845_060--Hb_021977_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.08254 3.67145 3.29171 5.05653 1.7638 2.23967
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.06093 1.1001 0.866218 4.11081 3.17213

CAGE analysis