Hb_001565_010

Information

Type -
Description -
Location Contig1565: 17824-20903
Sequence    

Annotation

kegg
ID pop:POPTR_0018s09540g
description POPTRDRAFT_779386; hypothetical protein
nr
ID KDP33800.1
description hypothetical protein JCGZ_07371 [Jatropha curcas]
swissprot
ID Q9SGP2
description Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1
trembl
ID A0A067KNE6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07371 PE=3 SV=1
Gene Ontology
ID GO:0016021
description receptor-like protein kinase hsl1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001565_010 0.0 - - hypothetical protein JCGZ_07371 [Jatropha curcas]
2 Hb_000108_090 0.0897480405 transcription factor TF Family: MYB PREDICTED: transcription repressor MYB5-like [Jatropha curcas]
3 Hb_094148_010 0.0943871405 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
4 Hb_000521_360 0.1015598446 - - PREDICTED: beta-glucosidase 17-like [Jatropha curcas]
5 Hb_004627_020 0.1018232319 - - Protein MLO, putative [Ricinus communis]
6 Hb_001345_010 0.1039480328 - - hypothetical protein MIMGU_mgv1a010889mg [Erythranthe guttata]
7 Hb_001634_080 0.1042171386 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
8 Hb_007676_040 0.1074136831 - - cellulose synthase, putative [Ricinus communis]
9 Hb_170878_070 0.1100181016 - - hypothetical protein EUGRSUZ_L008133, partial [Eucalyptus grandis]
10 Hb_005542_040 0.1226469062 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 55 [Jatropha curcas]
11 Hb_107809_010 0.1265519683 - - JHL06P13.14 [Jatropha curcas]
12 Hb_005276_220 0.1276909453 transcription factor TF Family: bHLH PREDICTED: basic helix-loop-helix protein A [Jatropha curcas]
13 Hb_170878_050 0.1345528388 - - retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]
14 Hb_003842_010 0.1393333322 - - receptor protein kinase, putative [Ricinus communis]
15 Hb_000289_100 0.1400166219 - - carbonyl reductase, putative [Ricinus communis]
16 Hb_003224_010 0.1416584438 - - -
17 Hb_008899_030 0.1448037637 - - Lipase class 3-related protein, putative [Theobroma cacao]
18 Hb_002960_010 0.1451011266 - - Zeamatin precursor, putative [Ricinus communis]
19 Hb_000261_370 0.1494250956 - - -
20 Hb_005523_050 0.1520296829 - - hypothetical protein JCGZ_09175 [Jatropha curcas]

Gene co-expression network

sample Hb_001565_010 Hb_001565_010 Hb_000108_090 Hb_000108_090 Hb_001565_010--Hb_000108_090 Hb_094148_010 Hb_094148_010 Hb_001565_010--Hb_094148_010 Hb_000521_360 Hb_000521_360 Hb_001565_010--Hb_000521_360 Hb_004627_020 Hb_004627_020 Hb_001565_010--Hb_004627_020 Hb_001345_010 Hb_001345_010 Hb_001565_010--Hb_001345_010 Hb_001634_080 Hb_001634_080 Hb_001565_010--Hb_001634_080 Hb_000108_090--Hb_001634_080 Hb_107809_010 Hb_107809_010 Hb_000108_090--Hb_107809_010 Hb_005542_040 Hb_005542_040 Hb_000108_090--Hb_005542_040 Hb_007676_040 Hb_007676_040 Hb_000108_090--Hb_007676_040 Hb_000108_090--Hb_094148_010 Hb_003224_010 Hb_003224_010 Hb_094148_010--Hb_003224_010 Hb_094148_010--Hb_001634_080 Hb_000261_370 Hb_000261_370 Hb_094148_010--Hb_000261_370 Hb_170878_070 Hb_170878_070 Hb_094148_010--Hb_170878_070 Hb_000521_360--Hb_001345_010 Hb_000521_360--Hb_107809_010 Hb_000521_360--Hb_005542_040 Hb_005276_220 Hb_005276_220 Hb_000521_360--Hb_005276_220 Hb_000521_360--Hb_007676_040 Hb_008899_030 Hb_008899_030 Hb_004627_020--Hb_008899_030 Hb_009554_030 Hb_009554_030 Hb_004627_020--Hb_009554_030 Hb_011537_020 Hb_011537_020 Hb_004627_020--Hb_011537_020 Hb_000203_080 Hb_000203_080 Hb_004627_020--Hb_000203_080 Hb_004627_020--Hb_170878_070 Hb_001345_010--Hb_007676_040 Hb_003842_010 Hb_003842_010 Hb_001345_010--Hb_003842_010 Hb_001345_010--Hb_005542_040 Hb_001345_010--Hb_005276_220 Hb_001634_080--Hb_107809_010 Hb_001634_080--Hb_005542_040 Hb_127661_010 Hb_127661_010 Hb_001634_080--Hb_127661_010 Hb_170878_050 Hb_170878_050 Hb_001634_080--Hb_170878_050 Hb_001634_080--Hb_007676_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.491891 0.64387 0.203579 0 0.00557395
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0144702 0.0227739 0 0.957455 0.534516

CAGE analysis