Hb_001565_050

Information

Type -
Description -
Location Contig1565: 41128-44285
Sequence    

Annotation

kegg
ID egr:104439056
description receptor-like protein kinase 5
nr
ID XP_010050478.1
description PREDICTED: receptor-like protein kinase 5 [Eucalyptus grandis]
swissprot
ID O64774
description G-type lectin S-receptor-like serine/threonine-protein kinase At1g61460 OS=Arabidopsis thaliana GN=At1g61460 PE=2 SV=4
trembl
ID K7V8V5
description Uncharacterized protein OS=Zea mays GN=ZEAMMB73_943636 PE=3 SV=1
Gene Ontology
ID GO:0016020
description receptor-like protein kinase 5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_13607: 43521-43981
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001565_050 0.0 - - PREDICTED: receptor-like protein kinase 5 [Eucalyptus grandis]
2 Hb_142691_010 0.0652160494 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 [Jatropha curcas]
3 Hb_012691_040 0.0653440104 - - PREDICTED: cytochrome P450 81E8-like [Fragaria vesca subsp. vesca]
4 Hb_034132_010 0.0665719058 - - hypothetical protein B456_007G015400 [Gossypium raimondii]
5 Hb_015978_040 0.0712218131 - - PREDICTED: uncharacterized protein LOC105642609 [Jatropha curcas]
6 Hb_008579_010 0.0727221493 - - hypothetical protein JCGZ_01311 [Jatropha curcas]
7 Hb_001514_110 0.0740964004 - - conserved hypothetical protein [Ricinus communis]
8 Hb_002486_030 0.0773281668 - - PREDICTED: nuclear speckle splicing regulatory protein 1-like [Jatropha curcas]
9 Hb_117602_010 0.0785104428 - - dimethylaniline monooxygenase, putative [Ricinus communis]
10 Hb_005843_080 0.0798786187 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
11 Hb_005725_180 0.079887376 - - -
12 Hb_073423_010 0.079969175 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
13 Hb_004117_360 0.081968406 - - hypothetical protein JCGZ_00367 [Jatropha curcas]
14 Hb_147137_020 0.0825454253 - - hypothetical protein JCGZ_07227 [Jatropha curcas]
15 Hb_000086_600 0.0842148979 - - -
16 Hb_022768_010 0.0847360146 transcription factor TF Family: MYB PREDICTED: myb-related protein Myb4-like [Populus euphratica]
17 Hb_004157_080 0.0936456348 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT12 [Jatropha curcas]
18 Hb_005843_070 0.0966783466 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF109-like [Jatropha curcas]
19 Hb_031862_150 0.0974767428 - - PREDICTED: mitochondrial uncoupling protein 5 [Jatropha curcas]
20 Hb_104855_020 0.0983169323 - - ankyrin repeat-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_001565_050 Hb_001565_050 Hb_142691_010 Hb_142691_010 Hb_001565_050--Hb_142691_010 Hb_012691_040 Hb_012691_040 Hb_001565_050--Hb_012691_040 Hb_034132_010 Hb_034132_010 Hb_001565_050--Hb_034132_010 Hb_015978_040 Hb_015978_040 Hb_001565_050--Hb_015978_040 Hb_008579_010 Hb_008579_010 Hb_001565_050--Hb_008579_010 Hb_001514_110 Hb_001514_110 Hb_001565_050--Hb_001514_110 Hb_142691_010--Hb_008579_010 Hb_002486_030 Hb_002486_030 Hb_142691_010--Hb_002486_030 Hb_142691_010--Hb_012691_040 Hb_073423_010 Hb_073423_010 Hb_142691_010--Hb_073423_010 Hb_142691_010--Hb_001514_110 Hb_104855_020 Hb_104855_020 Hb_142691_010--Hb_104855_020 Hb_012691_040--Hb_001514_110 Hb_012691_040--Hb_008579_010 Hb_012691_040--Hb_073423_010 Hb_012691_040--Hb_002486_030 Hb_004117_360 Hb_004117_360 Hb_012691_040--Hb_004117_360 Hb_034132_010--Hb_015978_040 Hb_022768_010 Hb_022768_010 Hb_034132_010--Hb_022768_010 Hb_117602_010 Hb_117602_010 Hb_034132_010--Hb_117602_010 Hb_005843_080 Hb_005843_080 Hb_034132_010--Hb_005843_080 Hb_005725_180 Hb_005725_180 Hb_034132_010--Hb_005725_180 Hb_015978_040--Hb_005725_180 Hb_015978_040--Hb_022768_010 Hb_032966_010 Hb_032966_010 Hb_015978_040--Hb_032966_010 Hb_005843_070 Hb_005843_070 Hb_015978_040--Hb_005843_070 Hb_008579_010--Hb_002486_030 Hb_008579_010--Hb_073423_010 Hb_143232_020 Hb_143232_020 Hb_008579_010--Hb_143232_020 Hb_008579_010--Hb_104855_020 Hb_001514_110--Hb_004117_360 Hb_001514_110--Hb_005725_180 Hb_001514_110--Hb_073423_010 Hb_001514_110--Hb_002486_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0491635 26.7231 4.15866 2.00356 0.0568397 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0172271 0 0.0258549 0.0538217 0

CAGE analysis