Hb_001568_040

Information

Type -
Description -
Location Contig1568: 75140-75995
Sequence    

Annotation

kegg
ID rcu:RCOM_0726260
description hypothetical protein
nr
ID XP_002524908.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SFY9
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0726260 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001568_040 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000049_190 0.0231467366 - - nucleotide binding protein, putative [Ricinus communis]
3 Hb_018910_010 0.0364657858 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180-like isoform X3 [Citrus sinensis]
4 Hb_005665_100 0.0615036292 - - PREDICTED: RING-H2 finger protein ATL63-like [Populus euphratica]
5 Hb_000020_170 0.0644125142 - - PREDICTED: aspartic proteinase PCS1 [Jatropha curcas]
6 Hb_004693_040 0.066267624 - - -
7 Hb_005614_060 0.0696527964 - - Uncharacterized protein TCM_019750 [Theobroma cacao]
8 Hb_016734_110 0.0698949012 transcription factor TF Family: MYB-related hypothetical protein POPTR_0005s12390g [Populus trichocarpa]
9 Hb_001496_150 0.0757581706 - - PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 [Jatropha curcas]
10 Hb_029883_010 0.078266042 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
11 Hb_002308_040 0.0845618646 - - methyladenine glycosylase family protein [Populus trichocarpa]
12 Hb_002471_310 0.0870871045 - - PREDICTED: vacuolar iron transporter 1-like isoform X1 [Jatropha curcas]
13 Hb_004440_030 0.0897935922 transcription factor TF Family: MYB-related hypothetical protein POPTR_0005s12390g [Populus trichocarpa]
14 Hb_050898_040 0.0905695563 - - -
15 Hb_004686_040 0.0918518221 - - hypothetical protein POPTR_0016s05690g [Populus trichocarpa]
16 Hb_000664_010 0.095374281 - - PREDICTED: histidine-containing phosphotransfer protein 4-like [Jatropha curcas]
17 Hb_001357_110 0.0956252217 - - endo-1,4-beta-glucanase, putative [Ricinus communis]
18 Hb_000109_200 0.1005543845 - - hypothetical protein CISIN_1g037825mg [Citrus sinensis]
19 Hb_000227_290 0.1009280715 - - PREDICTED: uncharacterized protein LOC105631957 [Jatropha curcas]
20 Hb_153258_030 0.1013456882 - - hypothetical protein RCOM_0853150 [Ricinus communis]

Gene co-expression network

sample Hb_001568_040 Hb_001568_040 Hb_000049_190 Hb_000049_190 Hb_001568_040--Hb_000049_190 Hb_018910_010 Hb_018910_010 Hb_001568_040--Hb_018910_010 Hb_005665_100 Hb_005665_100 Hb_001568_040--Hb_005665_100 Hb_000020_170 Hb_000020_170 Hb_001568_040--Hb_000020_170 Hb_004693_040 Hb_004693_040 Hb_001568_040--Hb_004693_040 Hb_005614_060 Hb_005614_060 Hb_001568_040--Hb_005614_060 Hb_000049_190--Hb_018910_010 Hb_000049_190--Hb_005665_100 Hb_000049_190--Hb_005614_060 Hb_000049_190--Hb_004693_040 Hb_002308_040 Hb_002308_040 Hb_000049_190--Hb_002308_040 Hb_018910_010--Hb_004693_040 Hb_018910_010--Hb_005665_100 Hb_018910_010--Hb_002308_040 Hb_002471_310 Hb_002471_310 Hb_018910_010--Hb_002471_310 Hb_000664_010 Hb_000664_010 Hb_005665_100--Hb_000664_010 Hb_005665_100--Hb_005614_060 Hb_005665_100--Hb_002471_310 Hb_005665_100--Hb_002308_040 Hb_004686_040 Hb_004686_040 Hb_000020_170--Hb_004686_040 Hb_000109_200 Hb_000109_200 Hb_000020_170--Hb_000109_200 Hb_029883_010 Hb_029883_010 Hb_000020_170--Hb_029883_010 Hb_000134_190 Hb_000134_190 Hb_000020_170--Hb_000134_190 Hb_007317_050 Hb_007317_050 Hb_000020_170--Hb_007317_050 Hb_004693_040--Hb_002308_040 Hb_004693_040--Hb_002471_310 Hb_004693_040--Hb_005665_100 Hb_024066_020 Hb_024066_020 Hb_004693_040--Hb_024066_020 Hb_004440_030 Hb_004440_030 Hb_005614_060--Hb_004440_030 Hb_005614_060--Hb_000664_010 Hb_000227_290 Hb_000227_290 Hb_005614_060--Hb_000227_290 Hb_029584_030 Hb_029584_030 Hb_005614_060--Hb_029584_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.257806 0.88764 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.132504

CAGE analysis