Hb_001568_120

Information

Type -
Description -
Location Contig1568: 124109-125444
Sequence    

Annotation

kegg
ID rcu:RCOM_0725620
description wall-associated kinase, putative (EC:2.7.10.2)
nr
ID KDP20149.1
description hypothetical protein JCGZ_05918 [Jatropha curcas]
swissprot
ID P0C5E2
description Probable serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=2 SV=2
trembl
ID A0A067JKZ7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05918 PE=4 SV=1
Gene Ontology
ID GO:0004674
description probable serine threonine-protein kinase at1g18390 isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001568_120 0.0 - - hypothetical protein JCGZ_05918 [Jatropha curcas]
2 Hb_000000_070 0.0948250804 - - allene oxide synthase [Hevea brasiliensis]
3 Hb_117127_010 0.0971841694 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH106 [Jatropha curcas]
4 Hb_006698_020 0.1092929837 - - hypothetical protein JCGZ_04585 [Jatropha curcas]
5 Hb_029866_050 0.113946992 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor CRF4 [Jatropha curcas]
6 Hb_009683_010 0.1140497053 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
7 Hb_041145_010 0.1200577452 - - hypothetical protein CISIN_1g021653mg [Citrus sinensis]
8 Hb_013607_010 0.1209963892 transcription factor TF Family: bZIP PREDICTED: transcription factor TGA3 [Jatropha curcas]
9 Hb_008667_030 0.1249727741 - - PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
10 Hb_006615_180 0.1252357131 - - hypothetical protein B456_003G103400 [Gossypium raimondii]
11 Hb_000252_190 0.1286065789 - - PREDICTED: uncharacterized protein LOC105644975 [Jatropha curcas]
12 Hb_002529_080 0.1303574052 - - PREDICTED: 1-aminocyclopropane-1-carboxylate synthase [Jatropha curcas]
13 Hb_001104_270 0.1305106804 - - hypothetical protein POPTR_0007s13980g [Populus trichocarpa]
14 Hb_000649_160 0.1324907969 - - PREDICTED: nudix hydrolase 18, mitochondrial [Jatropha curcas]
15 Hb_005605_030 0.1342477931 - - hypothetical protein JCGZ_01308 [Jatropha curcas]
16 Hb_003602_090 0.1374096959 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA9-like [Jatropha curcas]
17 Hb_001897_030 0.1376620129 - - PREDICTED: actin-depolymerizing factor 5 [Jatropha curcas]
18 Hb_000991_110 0.1379424936 - - PREDICTED: uncharacterized protein LOC105636336 [Jatropha curcas]
19 Hb_174380_010 0.1383577054 - - kinase, putative [Ricinus communis]
20 Hb_127400_010 0.1385042385 desease resistance Gene Name: NB-ARC phosphoprotein phosphatase, putative [Ricinus communis]

Gene co-expression network

sample Hb_001568_120 Hb_001568_120 Hb_000000_070 Hb_000000_070 Hb_001568_120--Hb_000000_070 Hb_117127_010 Hb_117127_010 Hb_001568_120--Hb_117127_010 Hb_006698_020 Hb_006698_020 Hb_001568_120--Hb_006698_020 Hb_029866_050 Hb_029866_050 Hb_001568_120--Hb_029866_050 Hb_009683_010 Hb_009683_010 Hb_001568_120--Hb_009683_010 Hb_041145_010 Hb_041145_010 Hb_001568_120--Hb_041145_010 Hb_006615_180 Hb_006615_180 Hb_000000_070--Hb_006615_180 Hb_002529_080 Hb_002529_080 Hb_000000_070--Hb_002529_080 Hb_000000_070--Hb_117127_010 Hb_008667_030 Hb_008667_030 Hb_000000_070--Hb_008667_030 Hb_004122_020 Hb_004122_020 Hb_000000_070--Hb_004122_020 Hb_000098_250 Hb_000098_250 Hb_117127_010--Hb_000098_250 Hb_117127_010--Hb_008667_030 Hb_002410_010 Hb_002410_010 Hb_117127_010--Hb_002410_010 Hb_117127_010--Hb_002529_080 Hb_117127_010--Hb_006615_180 Hb_013720_010 Hb_013720_010 Hb_006698_020--Hb_013720_010 Hb_006698_020--Hb_008667_030 Hb_006698_020--Hb_000000_070 Hb_006698_020--Hb_029866_050 Hb_000331_710 Hb_000331_710 Hb_006698_020--Hb_000331_710 Hb_006698_020--Hb_002529_080 Hb_000649_160 Hb_000649_160 Hb_029866_050--Hb_000649_160 Hb_000003_420 Hb_000003_420 Hb_029866_050--Hb_000003_420 Hb_000359_080 Hb_000359_080 Hb_029866_050--Hb_000359_080 Hb_000473_080 Hb_000473_080 Hb_029866_050--Hb_000473_080 Hb_001289_030 Hb_001289_030 Hb_009683_010--Hb_001289_030 Hb_012545_080 Hb_012545_080 Hb_009683_010--Hb_012545_080 Hb_007407_010 Hb_007407_010 Hb_009683_010--Hb_007407_010 Hb_003582_020 Hb_003582_020 Hb_009683_010--Hb_003582_020 Hb_001411_150 Hb_001411_150 Hb_009683_010--Hb_001411_150 Hb_000110_330 Hb_000110_330 Hb_041145_010--Hb_000110_330 Hb_041145_010--Hb_117127_010 Hb_133845_010 Hb_133845_010 Hb_041145_010--Hb_133845_010 Hb_003602_090 Hb_003602_090 Hb_041145_010--Hb_003602_090 Hb_127400_010 Hb_127400_010 Hb_041145_010--Hb_127400_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.182072 188.916 49.4977 75.5717 0 0.0631773
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0618447 0.243162 0.088483 24.67 8.94003

CAGE analysis