Hb_001575_090

Information

Type -
Description -
Location Contig1575: 173010-192967
Sequence    

Annotation

kegg
ID vvi:100259893
description putative glucose-6-phosphate 1-epimerase
nr
ID XP_012075140.1
description PREDICTED: putative glucose-6-phosphate 1-epimerase [Jatropha curcas]
swissprot
ID Q40784
description Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1
trembl
ID A0A067KSZ7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10389 PE=4 SV=1
Gene Ontology
ID GO:0016853
description glucose-6-phosphate 1-epimerase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_13760: 173074-192864 , PASA_asmbl_13761: 173074-192864 , PASA_asmbl_13762: 179723-179857
cDNA
(Sanger)
(ID:Location)		 014_F24.ab1: 173076-190291 , 053_N09.ab1: 173074-190094

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001575_090 0.0 - - PREDICTED: putative glucose-6-phosphate 1-epimerase [Jatropha curcas]
2 Hb_000019_030 0.0548221923 - - PREDICTED: V-type proton ATPase subunit C [Gossypium raimondii]
3 Hb_000468_060 0.0645715238 - - ku P70 DNA helicase, putative [Ricinus communis]
4 Hb_000120_670 0.0702981649 - - PREDICTED: SRSF protein kinase 2-like [Jatropha curcas]
5 Hb_011671_240 0.0718000054 - - PREDICTED: WD repeat-containing protein WRAP73-like [Jatropha curcas]
6 Hb_014834_050 0.0735771236 - - conserved hypothetical protein [Ricinus communis]
7 Hb_003918_010 0.0754587985 - - PREDICTED: biotin--protein ligase 2-like [Jatropha curcas]
8 Hb_032208_090 0.0811479739 - - PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit [Jatropha curcas]
9 Hb_001159_130 0.0813640727 - - PREDICTED: protein cornichon homolog 4 [Jatropha curcas]
10 Hb_003693_070 0.0823515896 - - PREDICTED: S-(hydroxymethyl)glutathione dehydrogenase [Jatropha curcas]
11 Hb_000050_200 0.0826510412 - - ergosterol biosynthetic protein 28 [Jatropha curcas]
12 Hb_001009_270 0.0827024476 - - PREDICTED: 26S proteasome non-ATPase regulatory subunit 6 homolog [Jatropha curcas]
13 Hb_003226_140 0.0834018451 - - small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus communis]
14 Hb_023732_030 0.085462486 - - PREDICTED: proteinaceous RNase P 2-like isoform X2 [Jatropha curcas]
15 Hb_005357_080 0.0856923384 - - PREDICTED: tyrosyl-DNA phosphodiesterase 1 [Jatropha curcas]
16 Hb_003177_030 0.0877246384 - - PREDICTED: uncharacterized protein LOC105635357 [Jatropha curcas]
17 Hb_000603_150 0.0883267399 - - PREDICTED: guanine nucleotide-binding protein alpha-1 subunit [Jatropha curcas]
18 Hb_002473_130 0.0884985811 - - PREDICTED: THO complex subunit 3 isoform X1 [Jatropha curcas]
19 Hb_000580_180 0.0885692321 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000028_590 0.0887434417 - - PREDICTED: putative serine/threonine-protein kinase [Jatropha curcas]

Gene co-expression network

sample Hb_001575_090 Hb_001575_090 Hb_000019_030 Hb_000019_030 Hb_001575_090--Hb_000019_030 Hb_000468_060 Hb_000468_060 Hb_001575_090--Hb_000468_060 Hb_000120_670 Hb_000120_670 Hb_001575_090--Hb_000120_670 Hb_011671_240 Hb_011671_240 Hb_001575_090--Hb_011671_240 Hb_014834_050 Hb_014834_050 Hb_001575_090--Hb_014834_050 Hb_003918_010 Hb_003918_010 Hb_001575_090--Hb_003918_010 Hb_005357_080 Hb_005357_080 Hb_000019_030--Hb_005357_080 Hb_000019_030--Hb_000120_670 Hb_000019_030--Hb_011671_240 Hb_000019_030--Hb_000468_060 Hb_000618_040 Hb_000618_040 Hb_000019_030--Hb_000618_040 Hb_003226_140 Hb_003226_140 Hb_000468_060--Hb_003226_140 Hb_000768_090 Hb_000768_090 Hb_000468_060--Hb_000768_090 Hb_000035_180 Hb_000035_180 Hb_000468_060--Hb_000035_180 Hb_000468_060--Hb_000120_670 Hb_003750_050 Hb_003750_050 Hb_000120_670--Hb_003750_050 Hb_000580_180 Hb_000580_180 Hb_000120_670--Hb_000580_180 Hb_003964_070 Hb_003964_070 Hb_000120_670--Hb_003964_070 Hb_001279_150 Hb_001279_150 Hb_000120_670--Hb_001279_150 Hb_000345_240 Hb_000345_240 Hb_000120_670--Hb_000345_240 Hb_000451_010 Hb_000451_010 Hb_011671_240--Hb_000451_010 Hb_011671_240--Hb_000618_040 Hb_004907_080 Hb_004907_080 Hb_011671_240--Hb_004907_080 Hb_019280_040 Hb_019280_040 Hb_011671_240--Hb_019280_040 Hb_003994_230 Hb_003994_230 Hb_014834_050--Hb_003994_230 Hb_000120_060 Hb_000120_060 Hb_014834_050--Hb_000120_060 Hb_000159_090 Hb_000159_090 Hb_014834_050--Hb_000159_090 Hb_007460_020 Hb_007460_020 Hb_014834_050--Hb_007460_020 Hb_023732_030 Hb_023732_030 Hb_014834_050--Hb_023732_030 Hb_172426_040 Hb_172426_040 Hb_003918_010--Hb_172426_040 Hb_000221_160 Hb_000221_160 Hb_003918_010--Hb_000221_160 Hb_001140_370 Hb_001140_370 Hb_003918_010--Hb_001140_370 Hb_002473_130 Hb_002473_130 Hb_003918_010--Hb_002473_130 Hb_000028_590 Hb_000028_590 Hb_003918_010--Hb_000028_590 Hb_008511_120 Hb_008511_120 Hb_003918_010--Hb_008511_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.1962 8.35205 13.4687 18.4851 17.8574 20.3769
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
20.7801 18.8568 21.3292 18.3363 7.10668

CAGE analysis