Hb_001575_100

Information

Type -
Description -
Location Contig1575: 193726-212807
Sequence    

Annotation

kegg
ID rcu:RCOM_0495910
description NADPH:adrenodoxin oxidoreductase, mitochondrial precursor, putative (EC:1.18.1.2)
nr
ID XP_012076735.1
description PREDICTED: NADPH:adrenodoxin oxidoreductase, mitochondrial [Jatropha curcas]
swissprot
ID Q8W3L1
description NADPH:adrenodoxin oxidoreductase, mitochondrial OS=Arabidopsis thaliana GN=MFDR PE=1 SV=1
trembl
ID A0A067KPK6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07275 PE=4 SV=1
Gene Ontology
ID GO:0016491
description nadph:adrenodoxin mitochondrial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_13763: 193712-195869 , PASA_asmbl_13764: 202930-204068 , PASA_asmbl_13765: 204536-212462
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001575_100 0.0 - - PREDICTED: NADPH:adrenodoxin oxidoreductase, mitochondrial [Jatropha curcas]
2 Hb_007026_030 0.0742337644 - - rubisco subunit binding-protein alpha subunit, ruba, putative [Ricinus communis]
3 Hb_178968_100 0.0781081488 - - PREDICTED: putative glucose-6-phosphate 1-epimerase isoform X1 [Populus euphratica]
4 Hb_001014_050 0.0803939023 transcription factor TF Family: Trihelix PREDICTED: uncharacterized protein LOC105647306 [Jatropha curcas]
5 Hb_008055_040 0.0848712527 - - PREDICTED: chromatin assembly factor 1 subunit FAS2 [Jatropha curcas]
6 Hb_000365_120 0.0898726301 - - PREDICTED: bifunctional protein FolD 1, mitochondrial [Jatropha curcas]
7 Hb_010661_030 0.0902495404 - - hypothetical protein PHAVU_009G146200g [Phaseolus vulgaris]
8 Hb_003467_010 0.0935697523 - - PREDICTED: probable thiol methyltransferase 2 [Jatropha curcas]
9 Hb_003849_060 0.095011741 - - PREDICTED: pentatricopeptide repeat-containing protein At1g13040, mitochondrial [Jatropha curcas]
10 Hb_006065_020 0.0958379012 - - -
11 Hb_000794_050 0.0959551089 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 12 [Jatropha curcas]
12 Hb_022250_030 0.0977879723 - - conserved hypothetical protein [Ricinus communis]
13 Hb_156973_010 0.0979792664 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000808_250 0.0980176594 - - PREDICTED: uncharacterized protein LOC105647419 [Jatropha curcas]
15 Hb_001348_070 0.0989595836 - - Uncharacterized protein isoform 1 [Theobroma cacao]
16 Hb_031939_010 0.0990313784 - - Coiled-coil domain-containing protein, putative [Ricinus communis]
17 Hb_000207_310 0.0993395033 - - PREDICTED: uncharacterized protein LOC105633932 [Jatropha curcas]
18 Hb_009421_020 0.1004779202 - - PREDICTED: caltractin-like [Jatropha curcas]
19 Hb_001936_060 0.1020490754 - - pyroglutamyl-peptidase I, putative [Ricinus communis]
20 Hb_000462_140 0.1022940893 - - PREDICTED: dnaJ homolog subfamily C member 28 [Jatropha curcas]

Gene co-expression network

sample Hb_001575_100 Hb_001575_100 Hb_007026_030 Hb_007026_030 Hb_001575_100--Hb_007026_030 Hb_178968_100 Hb_178968_100 Hb_001575_100--Hb_178968_100 Hb_001014_050 Hb_001014_050 Hb_001575_100--Hb_001014_050 Hb_008055_040 Hb_008055_040 Hb_001575_100--Hb_008055_040 Hb_000365_120 Hb_000365_120 Hb_001575_100--Hb_000365_120 Hb_010661_030 Hb_010661_030 Hb_001575_100--Hb_010661_030 Hb_000794_050 Hb_000794_050 Hb_007026_030--Hb_000794_050 Hb_007026_030--Hb_178968_100 Hb_003044_100 Hb_003044_100 Hb_007026_030--Hb_003044_100 Hb_000368_020 Hb_000368_020 Hb_007026_030--Hb_000368_020 Hb_012098_110 Hb_012098_110 Hb_007026_030--Hb_012098_110 Hb_004450_060 Hb_004450_060 Hb_178968_100--Hb_004450_060 Hb_000088_200 Hb_000088_200 Hb_178968_100--Hb_000088_200 Hb_000808_250 Hb_000808_250 Hb_178968_100--Hb_000808_250 Hb_003467_010 Hb_003467_010 Hb_178968_100--Hb_003467_010 Hb_006623_020 Hb_006623_020 Hb_178968_100--Hb_006623_020 Hb_005245_130 Hb_005245_130 Hb_001014_050--Hb_005245_130 Hb_003849_060 Hb_003849_060 Hb_001014_050--Hb_003849_060 Hb_002205_040 Hb_002205_040 Hb_001014_050--Hb_002205_040 Hb_001014_050--Hb_000794_050 Hb_011942_080 Hb_011942_080 Hb_001014_050--Hb_011942_080 Hb_000462_140 Hb_000462_140 Hb_001014_050--Hb_000462_140 Hb_001405_120 Hb_001405_120 Hb_008055_040--Hb_001405_120 Hb_008055_040--Hb_000365_120 Hb_000174_110 Hb_000174_110 Hb_008055_040--Hb_000174_110 Hb_156973_010 Hb_156973_010 Hb_008055_040--Hb_156973_010 Hb_002175_030 Hb_002175_030 Hb_008055_040--Hb_002175_030 Hb_009421_020 Hb_009421_020 Hb_000365_120--Hb_009421_020 Hb_007632_030 Hb_007632_030 Hb_000365_120--Hb_007632_030 Hb_001390_110 Hb_001390_110 Hb_000365_120--Hb_001390_110 Hb_002141_030 Hb_002141_030 Hb_000365_120--Hb_002141_030 Hb_000365_120--Hb_156973_010 Hb_005697_060 Hb_005697_060 Hb_000365_120--Hb_005697_060 Hb_001635_170 Hb_001635_170 Hb_010661_030--Hb_001635_170 Hb_007576_040 Hb_007576_040 Hb_010661_030--Hb_007576_040 Hb_001404_100 Hb_001404_100 Hb_010661_030--Hb_001404_100 Hb_007154_020 Hb_007154_020 Hb_010661_030--Hb_007154_020 Hb_002233_150 Hb_002233_150 Hb_010661_030--Hb_002233_150 Hb_003069_010 Hb_003069_010 Hb_010661_030--Hb_003069_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.0117 3.50345 4.95639 1.84946 8.27726 7.9851
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.18694 8.05757 3.68444 3.64835 4.07808

CAGE analysis