Hb_001579_320

Information

Type -
Description -
Location Contig1579: 220033-222300
Sequence    

Annotation

kegg
ID rcu:RCOM_0527850
description pyroglutamyl-peptidase I, putative (EC:3.4.19.3)
nr
ID XP_002525358.1
description pyroglutamyl-peptidase I, putative [Ricinus communis]
swissprot
ID O73944
description Pyrrolidone-carboxylate peptidase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=pcp PE=1 SV=1
trembl
ID B9SH89
description Pyroglutamyl-peptidase I, putative OS=Ricinus communis GN=RCOM_0527850 PE=4 SV=1
Gene Ontology
ID GO:0005829
description pyroglutamyl-peptidase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_13846: 220112-222286 , PASA_asmbl_13847: 220436-222286 , PASA_asmbl_13848: 222859-228316 , PASA_asmbl_13849: 222875-228760
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001579_320 0.0 - - pyroglutamyl-peptidase I, putative [Ricinus communis]
2 Hb_001946_010 0.0610363208 - - CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]
3 Hb_000526_050 0.0647894563 - - PREDICTED: chaperone protein dnaJ 1, mitochondrial [Jatropha curcas]
4 Hb_003952_070 0.0650703768 - - ubiquitin-protein ligase, putative [Ricinus communis]
5 Hb_000193_190 0.0702784633 - - PREDICTED: dnaJ homolog subfamily C member 16 [Jatropha curcas]
6 Hb_003025_110 0.0715317423 - - PREDICTED: serine/threonine-protein kinase HT1 isoform X1 [Jatropha curcas]
7 Hb_040262_010 0.0718481955 - - PREDICTED: aspartate carbamoyltransferase 1, chloroplastic [Jatropha curcas]
8 Hb_000853_350 0.0722707793 - - PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase-like [Jatropha curcas]
9 Hb_000205_100 0.0739525504 - - PREDICTED: exportin-4 [Jatropha curcas]
10 Hb_000058_100 0.0756383083 - - PREDICTED: RNA-directed DNA methylation 4 [Jatropha curcas]
11 Hb_007594_130 0.076732746 - - PREDICTED: lysophospholipid acyltransferase LPEAT2 isoform X1 [Jatropha curcas]
12 Hb_008406_110 0.0771190763 - - PREDICTED: putative E3 ubiquitin-protein ligase RING1a isoform X1 [Jatropha curcas]
13 Hb_103012_010 0.0775562601 - - PREDICTED: uncharacterized protein LOC105638878 [Jatropha curcas]
14 Hb_000853_170 0.0782463185 - - PREDICTED: programmed cell death protein 2 isoform X3 [Populus euphratica]
15 Hb_027472_150 0.0818916783 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 10 [Jatropha curcas]
16 Hb_004881_020 0.0824470476 - - PREDICTED: serine/threonine-protein kinase rio2-like [Jatropha curcas]
17 Hb_001006_140 0.082561456 transcription factor TF Family: SNF2 PREDICTED: protein CHROMATIN REMODELING 19 isoform X2 [Jatropha curcas]
18 Hb_000260_170 0.0826472061 - - PREDICTED: putative zinc transporter At3g08650 [Cucumis sativus]
19 Hb_007575_050 0.0857882912 transcription factor TF Family: BBR-BPC PREDICTED: protein BASIC PENTACYSTEINE6 [Jatropha curcas]
20 Hb_000023_220 0.08640995 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 18 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_001579_320 Hb_001579_320 Hb_001946_010 Hb_001946_010 Hb_001579_320--Hb_001946_010 Hb_000526_050 Hb_000526_050 Hb_001579_320--Hb_000526_050 Hb_003952_070 Hb_003952_070 Hb_001579_320--Hb_003952_070 Hb_000193_190 Hb_000193_190 Hb_001579_320--Hb_000193_190 Hb_003025_110 Hb_003025_110 Hb_001579_320--Hb_003025_110 Hb_040262_010 Hb_040262_010 Hb_001579_320--Hb_040262_010 Hb_103012_010 Hb_103012_010 Hb_001946_010--Hb_103012_010 Hb_000260_170 Hb_000260_170 Hb_001946_010--Hb_000260_170 Hb_011930_160 Hb_011930_160 Hb_001946_010--Hb_011930_160 Hb_001946_010--Hb_000193_190 Hb_001946_010--Hb_003025_110 Hb_000205_100 Hb_000205_100 Hb_001946_010--Hb_000205_100 Hb_005098_010 Hb_005098_010 Hb_000526_050--Hb_005098_010 Hb_007594_130 Hb_007594_130 Hb_000526_050--Hb_007594_130 Hb_000526_050--Hb_040262_010 Hb_004881_020 Hb_004881_020 Hb_000526_050--Hb_004881_020 Hb_003375_070 Hb_003375_070 Hb_000526_050--Hb_003375_070 Hb_003952_070--Hb_004881_020 Hb_006252_040 Hb_006252_040 Hb_003952_070--Hb_006252_040 Hb_003952_070--Hb_007594_130 Hb_000538_100 Hb_000538_100 Hb_003952_070--Hb_000538_100 Hb_005276_210 Hb_005276_210 Hb_003952_070--Hb_005276_210 Hb_001489_150 Hb_001489_150 Hb_003952_070--Hb_001489_150 Hb_000193_190--Hb_000205_100 Hb_000011_200 Hb_000011_200 Hb_000193_190--Hb_000011_200 Hb_000225_040 Hb_000225_040 Hb_000193_190--Hb_000225_040 Hb_007576_110 Hb_007576_110 Hb_000193_190--Hb_007576_110 Hb_000193_190--Hb_011930_160 Hb_004410_030 Hb_004410_030 Hb_003025_110--Hb_004410_030 Hb_003025_110--Hb_000011_200 Hb_007575_050 Hb_007575_050 Hb_003025_110--Hb_007575_050 Hb_003025_110--Hb_011930_160 Hb_000617_180 Hb_000617_180 Hb_003025_110--Hb_000617_180 Hb_002671_100 Hb_002671_100 Hb_040262_010--Hb_002671_100 Hb_040262_010--Hb_103012_010 Hb_040262_010--Hb_001946_010 Hb_007317_110 Hb_007317_110 Hb_040262_010--Hb_007317_110 Hb_040262_010--Hb_000260_170 Hb_040262_010--Hb_007594_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
21.1215 16.1291 15.5214 15.5454 33.4535 33.0113
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
31.6493 24.5592 13.7691 24.9302 15.3841

CAGE analysis