Hb_001584_290

Information

Type -
Description -
Location Contig1584: 162245-167261
Sequence    

Annotation

kegg
ID rcu:RCOM_1436130
description glucose-6-phosphate 1-dehydrogenase, putative (EC:1.1.1.49)
nr
ID AIE47269.1
description glucose-6-phosphate dehydrogenase [Hevea brasiliensis]
swissprot
ID Q93ZW0
description Glucose-6-phosphate 1-dehydrogenase 4, chloroplastic OS=Arabidopsis thaliana GN=At1g09420 PE=2 SV=1
trembl
ID A0A068LJB4
description Glucose-6-phosphate 1-dehydrogenase OS=Hevea brasiliensis GN=G6PDH-4 PE=2 SV=1
Gene Ontology
ID GO:0004345
description glucose-6-phosphate 1-dehydrogenase chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_13989: 162412-167226
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001584_290 0.0 - - glucose-6-phosphate dehydrogenase [Hevea brasiliensis]
2 Hb_008143_030 0.0495704674 - - PREDICTED: uncharacterized protein LOC105650295 isoform X2 [Jatropha curcas]
3 Hb_010222_080 0.0576802234 - - PREDICTED: pentatricopeptide repeat-containing protein At2g06000 [Jatropha curcas]
4 Hb_000104_080 0.0604082481 - - PREDICTED: WD repeat domain-containing protein 83 [Jatropha curcas]
5 Hb_002587_020 0.0694506084 - - nucleic acid binding protein, putative [Ricinus communis]
6 Hb_000923_040 0.0708485593 - - PREDICTED: 15 kDa selenoprotein [Jatropha curcas]
7 Hb_000640_220 0.0742903841 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP21-4 [Jatropha curcas]
8 Hb_000139_250 0.0788410602 - - PREDICTED: putative methyltransferase C9orf114 [Jatropha curcas]
9 Hb_003006_060 0.0801245717 - - PREDICTED: pre-mRNA-splicing factor syf2 [Jatropha curcas]
10 Hb_002477_130 0.0802407854 - - conserved hypothetical protein [Ricinus communis]
11 Hb_002942_220 0.0816807268 - - PREDICTED: uncharacterized protein LOC105648740 [Jatropha curcas]
12 Hb_010222_030 0.0817166537 - - PREDICTED: uncharacterized protein LOC105647641 [Jatropha curcas]
13 Hb_000424_010 0.0830955351 - - PREDICTED: F-box/LRR-repeat protein 15 isoform X1 [Jatropha curcas]
14 Hb_000034_050 0.0836024169 - - PREDICTED: uncharacterized protein LOC105637912 [Jatropha curcas]
15 Hb_001863_110 0.0846181776 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
16 Hb_002652_040 0.0854844441 - - PREDICTED: ribonuclease P protein subunit p25-like protein [Jatropha curcas]
17 Hb_000236_280 0.0858253626 - - PREDICTED: coiled-coil domain-containing protein 22 homolog isoform X1 [Jatropha curcas]
18 Hb_004678_020 0.0871272543 - - PREDICTED: protein YIF1B [Jatropha curcas]
19 Hb_023001_020 0.0872654032 - - PREDICTED: mitochondrial succinate-fumarate transporter 1 [Jatropha curcas]
20 Hb_000365_140 0.0874473554 - - PREDICTED: ethanolamine-phosphate cytidylyltransferase [Jatropha curcas]

Gene co-expression network

sample Hb_001584_290 Hb_001584_290 Hb_008143_030 Hb_008143_030 Hb_001584_290--Hb_008143_030 Hb_010222_080 Hb_010222_080 Hb_001584_290--Hb_010222_080 Hb_000104_080 Hb_000104_080 Hb_001584_290--Hb_000104_080 Hb_002587_020 Hb_002587_020 Hb_001584_290--Hb_002587_020 Hb_000923_040 Hb_000923_040 Hb_001584_290--Hb_000923_040 Hb_000640_220 Hb_000640_220 Hb_001584_290--Hb_000640_220 Hb_108216_040 Hb_108216_040 Hb_008143_030--Hb_108216_040 Hb_000035_040 Hb_000035_040 Hb_008143_030--Hb_000035_040 Hb_000640_320 Hb_000640_320 Hb_008143_030--Hb_000640_320 Hb_008143_030--Hb_000104_080 Hb_002652_040 Hb_002652_040 Hb_008143_030--Hb_002652_040 Hb_002942_220 Hb_002942_220 Hb_010222_080--Hb_002942_220 Hb_017168_010 Hb_017168_010 Hb_010222_080--Hb_017168_010 Hb_000139_250 Hb_000139_250 Hb_010222_080--Hb_000139_250 Hb_004678_020 Hb_004678_020 Hb_010222_080--Hb_004678_020 Hb_004162_280 Hb_004162_280 Hb_010222_080--Hb_004162_280 Hb_000104_080--Hb_000923_040 Hb_028707_090 Hb_028707_090 Hb_000104_080--Hb_028707_090 Hb_000236_280 Hb_000236_280 Hb_000104_080--Hb_000236_280 Hb_023001_020 Hb_023001_020 Hb_000104_080--Hb_023001_020 Hb_002587_020--Hb_008143_030 Hb_002587_020--Hb_002652_040 Hb_030827_030 Hb_030827_030 Hb_002587_020--Hb_030827_030 Hb_008595_010 Hb_008595_010 Hb_002587_020--Hb_008595_010 Hb_007407_040 Hb_007407_040 Hb_002587_020--Hb_007407_040 Hb_008887_050 Hb_008887_050 Hb_000923_040--Hb_008887_050 Hb_000345_530 Hb_000345_530 Hb_000923_040--Hb_000345_530 Hb_000923_040--Hb_023001_020 Hb_001040_040 Hb_001040_040 Hb_000923_040--Hb_001040_040 Hb_021422_010 Hb_021422_010 Hb_000640_220--Hb_021422_010 Hb_002477_130 Hb_002477_130 Hb_000640_220--Hb_002477_130 Hb_000640_220--Hb_000104_080 Hb_000365_140 Hb_000365_140 Hb_000640_220--Hb_000365_140 Hb_003126_100 Hb_003126_100 Hb_000640_220--Hb_003126_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
49.1457 17.7921 16.6993 16.6367 64.3707 46.5762
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
22.8561 18.3777 23.8503 15.0014 14.9378

CAGE analysis