Hb_001597_020

Information

Type -
Description -
Location Contig1597: 40869-43406
Sequence    

Annotation

kegg
ID pop:POPTR_0001s30910g
description POPTRDRAFT_838773; hypothetical protein
nr
ID XP_012066978.1
description PREDICTED: uncharacterized protein LOC105629846 isoform X2 [Jatropha curcas]
swissprot
ID Q81CK1
description Kynurenine formamidase OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711) GN=kynB PE=1 SV=1
trembl
ID A0A067LFF7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22133 PE=4 SV=1
Gene Ontology
ID GO:0004061
description cyclase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_14206: 40897-43343
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001597_020 0.0 - - PREDICTED: uncharacterized protein LOC105629846 isoform X2 [Jatropha curcas]
2 Hb_150651_020 0.09128582 - - Periplasmic beta-glucosidase precursor, putative [Ricinus communis]
3 Hb_004705_070 0.1206862113 - - PREDICTED: uncharacterized protein LOC105647312 isoform X1 [Jatropha curcas]
4 Hb_001001_120 0.1227143159 - - protein phosphatase, putative [Ricinus communis]
5 Hb_009692_040 0.1261970414 - - PREDICTED: peptide chain release factor PrfB3, chloroplastic isoform X1 [Jatropha curcas]
6 Hb_164926_010 0.130802628 - - Granule-bound starch synthase 1, chloroplastic/amyloplastic [Gossypium arboreum]
7 Hb_001365_030 0.1360472552 - - PREDICTED: uncharacterized protein LOC102609547 [Citrus sinensis]
8 Hb_000454_100 0.1362861379 - - aldo-keto reductase, putative [Ricinus communis]
9 Hb_000696_190 0.142576298 - - PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 1 [Jatropha curcas]
10 Hb_007765_130 0.1426609331 - - PREDICTED: UPF0503 protein At3g09070, chloroplastic [Jatropha curcas]
11 Hb_000042_050 0.1432366086 - - PREDICTED: uncharacterized protein LOC105632791 isoform X1 [Jatropha curcas]
12 Hb_004242_170 0.1471618431 - - calcium/calmodulin-regulated receptor-like kinase [Manihot esculenta]
13 Hb_126933_020 0.1478352825 - - PREDICTED: uncharacterized protein LOC105638525 [Jatropha curcas]
14 Hb_004837_210 0.1499916816 - - PREDICTED: calcium-dependent protein kinase 8-like [Jatropha curcas]
15 Hb_003894_060 0.1507033791 - - conserved hypothetical protein [Ricinus communis]
16 Hb_002662_110 0.150856342 - - Kinesin heavy chain, putative [Ricinus communis]
17 Hb_032631_030 0.1509872248 - - phosphatidic acid phosphatase, putative [Ricinus communis]
18 Hb_001348_090 0.1527769458 - - PREDICTED: long chain acyl-CoA synthetase 9, chloroplastic [Jatropha curcas]
19 Hb_050847_040 0.1534330269 - - PREDICTED: uncharacterized protein LOC105649141 [Jatropha curcas]
20 Hb_007894_190 0.1535543958 - - PREDICTED: uncharacterized protein LOC105632935 [Jatropha curcas]

Gene co-expression network

sample Hb_001597_020 Hb_001597_020 Hb_150651_020 Hb_150651_020 Hb_001597_020--Hb_150651_020 Hb_004705_070 Hb_004705_070 Hb_001597_020--Hb_004705_070 Hb_001001_120 Hb_001001_120 Hb_001597_020--Hb_001001_120 Hb_009692_040 Hb_009692_040 Hb_001597_020--Hb_009692_040 Hb_164926_010 Hb_164926_010 Hb_001597_020--Hb_164926_010 Hb_001365_030 Hb_001365_030 Hb_001597_020--Hb_001365_030 Hb_150651_020--Hb_001001_120 Hb_150651_020--Hb_004705_070 Hb_126933_020 Hb_126933_020 Hb_150651_020--Hb_126933_020 Hb_004635_070 Hb_004635_070 Hb_150651_020--Hb_004635_070 Hb_007894_190 Hb_007894_190 Hb_150651_020--Hb_007894_190 Hb_050847_040 Hb_050847_040 Hb_004705_070--Hb_050847_040 Hb_004705_070--Hb_126933_020 Hb_010683_030 Hb_010683_030 Hb_004705_070--Hb_010683_030 Hb_003894_060 Hb_003894_060 Hb_004705_070--Hb_003894_060 Hb_001001_120--Hb_001365_030 Hb_001001_120--Hb_004635_070 Hb_002942_140 Hb_002942_140 Hb_001001_120--Hb_002942_140 Hb_003175_070 Hb_003175_070 Hb_001001_120--Hb_003175_070 Hb_007982_040 Hb_007982_040 Hb_009692_040--Hb_007982_040 Hb_032631_030 Hb_032631_030 Hb_009692_040--Hb_032631_030 Hb_004242_170 Hb_004242_170 Hb_009692_040--Hb_004242_170 Hb_001053_020 Hb_001053_020 Hb_009692_040--Hb_001053_020 Hb_005977_060 Hb_005977_060 Hb_009692_040--Hb_005977_060 Hb_000441_050 Hb_000441_050 Hb_009692_040--Hb_000441_050 Hb_000803_220 Hb_000803_220 Hb_164926_010--Hb_000803_220 Hb_164926_010--Hb_007894_190 Hb_002005_040 Hb_002005_040 Hb_164926_010--Hb_002005_040 Hb_005618_150 Hb_005618_150 Hb_164926_010--Hb_005618_150 Hb_004837_210 Hb_004837_210 Hb_164926_010--Hb_004837_210 Hb_007576_180 Hb_007576_180 Hb_164926_010--Hb_007576_180 Hb_010632_020 Hb_010632_020 Hb_001365_030--Hb_010632_020 Hb_007765_130 Hb_007765_130 Hb_001365_030--Hb_007765_130 Hb_000940_030 Hb_000940_030 Hb_001365_030--Hb_000940_030 Hb_000679_080 Hb_000679_080 Hb_001365_030--Hb_000679_080 Hb_002044_160 Hb_002044_160 Hb_001365_030--Hb_002044_160 Hb_003053_070 Hb_003053_070 Hb_001365_030--Hb_003053_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.25379 5.90629 38.6624 25.2338 6.23365 4.74033
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.76548 0.714776 0.810278 10.0051 42.565

CAGE analysis