Hb_001604_010

Information

Type -
Description -
Location Contig1604: 4109-7683
Sequence    

Annotation

kegg
ID rcu:RCOM_0341430
description 14-3-3 protein, putative
nr
ID XP_002523376.1
description 14-3-3 protein, putative [Ricinus communis]
swissprot
ID P42654
description 14-3-3-like protein B OS=Vicia faba PE=2 SV=1
trembl
ID B9SBK7
description 14-3-3 protein, putative OS=Ricinus communis GN=RCOM_0341430 PE=3 SV=1
Gene Ontology
ID GO:0005634
description 14-3-3 brain family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_14352: 4079-6903
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001604_010 0.0 - - 14-3-3 protein, putative [Ricinus communis]
2 Hb_007441_120 0.0745023661 - - PREDICTED: dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X2 [Jatropha curcas]
3 Hb_015746_010 0.0786847294 - - PREDICTED: triacylglycerol lipase 2-like [Jatropha curcas]
4 Hb_028872_140 0.0787839916 - - PREDICTED: uncharacterized protein LOC105644767 isoform X1 [Jatropha curcas]
5 Hb_001248_130 0.0796671399 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 69 isoform X1 [Jatropha curcas]
6 Hb_000120_950 0.0803567378 - - PREDICTED: protein GRIP [Jatropha curcas]
7 Hb_001584_330 0.0814779807 - - PREDICTED: shaggy-related protein kinase alpha [Jatropha curcas]
8 Hb_000190_140 0.0821826373 transcription factor TF Family: TRAF PREDICTED: ETO1-like protein 1 [Jatropha curcas]
9 Hb_004223_130 0.0822396297 - - conserved hypothetical protein [Ricinus communis]
10 Hb_002253_070 0.0827881629 transcription factor TF Family: NAC NAC transcription factor 042 [Jatropha curcas]
11 Hb_012022_030 0.0833152162 transcription factor TF Family: Alfin-like phd/F-box containing protein, putative [Ricinus communis]
12 Hb_002030_030 0.0836283988 - - PREDICTED: GLABRA2 expression modulator [Jatropha curcas]
13 Hb_000032_570 0.084716431 transcription factor TF Family: Coactivator p15 PREDICTED: RNA polymerase II transcriptional coactivator KELP [Jatropha curcas]
14 Hb_001454_210 0.0850621588 - - PREDICTED: uncharacterized protein LOC105643435 [Jatropha curcas]
15 Hb_003976_010 0.0854010568 - - methionine aminopeptidase, putative [Ricinus communis]
16 Hb_000062_240 0.0854993016 - - PREDICTED: signal recognition particle subunit SRP72 [Jatropha curcas]
17 Hb_001135_050 0.0855095431 - - PREDICTED: nitrilase-like protein 2 isoform X1 [Jatropha curcas]
18 Hb_002900_190 0.0855575229 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GTL1 [Jatropha curcas]
19 Hb_000051_110 0.0859583724 - - conserved hypothetical protein [Ricinus communis]
20 Hb_004048_070 0.085971838 - - PREDICTED: anaphase-promoting complex subunit 6 [Jatropha curcas]

Gene co-expression network

sample Hb_001604_010 Hb_001604_010 Hb_007441_120 Hb_007441_120 Hb_001604_010--Hb_007441_120 Hb_015746_010 Hb_015746_010 Hb_001604_010--Hb_015746_010 Hb_028872_140 Hb_028872_140 Hb_001604_010--Hb_028872_140 Hb_001248_130 Hb_001248_130 Hb_001604_010--Hb_001248_130 Hb_000120_950 Hb_000120_950 Hb_001604_010--Hb_000120_950 Hb_001584_330 Hb_001584_330 Hb_001604_010--Hb_001584_330 Hb_005663_060 Hb_005663_060 Hb_007441_120--Hb_005663_060 Hb_002016_110 Hb_002016_110 Hb_007441_120--Hb_002016_110 Hb_007441_120--Hb_028872_140 Hb_000445_420 Hb_000445_420 Hb_007441_120--Hb_000445_420 Hb_004055_030 Hb_004055_030 Hb_007441_120--Hb_004055_030 Hb_006922_100 Hb_006922_100 Hb_007441_120--Hb_006922_100 Hb_002043_190 Hb_002043_190 Hb_015746_010--Hb_002043_190 Hb_000327_120 Hb_000327_120 Hb_015746_010--Hb_000327_120 Hb_004048_070 Hb_004048_070 Hb_015746_010--Hb_004048_070 Hb_000853_170 Hb_000853_170 Hb_015746_010--Hb_000853_170 Hb_001571_040 Hb_001571_040 Hb_015746_010--Hb_001571_040 Hb_000061_370 Hb_000061_370 Hb_015746_010--Hb_000061_370 Hb_001454_210 Hb_001454_210 Hb_028872_140--Hb_001454_210 Hb_000398_180 Hb_000398_180 Hb_028872_140--Hb_000398_180 Hb_033642_010 Hb_033642_010 Hb_028872_140--Hb_033642_010 Hb_009111_050 Hb_009111_050 Hb_028872_140--Hb_009111_050 Hb_002811_360 Hb_002811_360 Hb_028872_140--Hb_002811_360 Hb_015306_020 Hb_015306_020 Hb_028872_140--Hb_015306_020 Hb_020178_070 Hb_020178_070 Hb_001248_130--Hb_020178_070 Hb_000567_260 Hb_000567_260 Hb_001248_130--Hb_000567_260 Hb_189003_080 Hb_189003_080 Hb_001248_130--Hb_189003_080 Hb_001248_130--Hb_007441_120 Hb_000207_250 Hb_000207_250 Hb_001248_130--Hb_000207_250 Hb_001248_130--Hb_002016_110 Hb_000030_010 Hb_000030_010 Hb_000120_950--Hb_000030_010 Hb_000754_060 Hb_000754_060 Hb_000120_950--Hb_000754_060 Hb_000190_140 Hb_000190_140 Hb_000120_950--Hb_000190_140 Hb_000436_070 Hb_000436_070 Hb_000120_950--Hb_000436_070 Hb_001623_420 Hb_001623_420 Hb_000120_950--Hb_001623_420 Hb_002477_160 Hb_002477_160 Hb_000120_950--Hb_002477_160 Hb_001584_330--Hb_001623_420 Hb_005306_110 Hb_005306_110 Hb_001584_330--Hb_005306_110 Hb_004812_010 Hb_004812_010 Hb_001584_330--Hb_004812_010 Hb_006400_040 Hb_006400_040 Hb_001584_330--Hb_006400_040 Hb_001584_330--Hb_000120_950 Hb_000139_410 Hb_000139_410 Hb_001584_330--Hb_000139_410
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
127.817 44.5314 42.8199 35.1241 116.662 124.384
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
152.386 92.4873 134.198 85.1675 28.8984

CAGE analysis