Hb_001610_070

Information

Type -
Description -
Location Contig1610: 87707-89419
Sequence    

Annotation

kegg
ID fve:101313482
description subtilisin-like protease-like
nr
ID EYU29364.1
description hypothetical protein MIMGU_mgv1a022867mg [Erythranthe guttata]
swissprot
ID F4HYR6
description Subtilisin-like protease SBT2.4 OS=Arabidopsis thaliana GN=SBT2.4 PE=1 SV=1
trembl
ID A0A022QP32
description Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a022867mg PE=4 SV=1
Gene Ontology
ID GO:0004252
description xylem serine proteinase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001610_070 0.0 - - hypothetical protein MIMGU_mgv1a022867mg [Erythranthe guttata]
2 Hb_001198_160 0.0710367562 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
3 Hb_000028_330 0.0727092616 - - PREDICTED: mitogen-activated protein kinase kinase 9-like [Pyrus x bretschneideri]
4 Hb_011915_020 0.0796175846 - - PREDICTED: arogenate dehydratase/prephenate dehydratase 6, chloroplastic-like [Jatropha curcas]
5 Hb_006736_040 0.0836013952 - - PREDICTED: glucan endo-1,3-beta-glucosidase, basic isoform-like [Populus euphratica]
6 Hb_024650_010 0.1006574257 - - PREDICTED: BAHD acyltransferase DCR [Jatropha curcas]
7 Hb_000836_220 0.1049146005 - - UDP-glucosyltransferase, putative [Ricinus communis]
8 Hb_138086_010 0.1068155425 - - Auxin-induced in root cultures protein 12 precursor, putative [Ricinus communis]
9 Hb_029622_090 0.1104018744 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 2-like [Jatropha curcas]
10 Hb_001518_030 0.1112549942 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
11 Hb_001254_020 0.1118953554 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Jatropha curcas]
12 Hb_003435_040 0.1143333243 - - tonoplast intrinsic protein [Hevea brasiliensis]
13 Hb_021576_160 0.1181912934 transcription factor TF Family: WRKY putative WRKY transcription factor family protein [Populus trichocarpa]
14 Hb_004324_100 0.1201992382 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
15 Hb_007007_030 0.1202605122 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000032_090 0.1207154592 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001663_090 0.1215616832 - - ribonuclease t2, putative [Ricinus communis]
18 Hb_002374_030 0.122029038 - - PREDICTED: probable receptor-like protein kinase At1g11050 isoform X1 [Jatropha curcas]
19 Hb_000054_140 0.1220370304 - - PREDICTED: MACPF domain-containing protein CAD1 [Jatropha curcas]
20 Hb_001247_160 0.1223543798 - - s-adenosylmethionine synthetase, putative [Ricinus communis]

Gene co-expression network

sample Hb_001610_070 Hb_001610_070 Hb_001198_160 Hb_001198_160 Hb_001610_070--Hb_001198_160 Hb_000028_330 Hb_000028_330 Hb_001610_070--Hb_000028_330 Hb_011915_020 Hb_011915_020 Hb_001610_070--Hb_011915_020 Hb_006736_040 Hb_006736_040 Hb_001610_070--Hb_006736_040 Hb_024650_010 Hb_024650_010 Hb_001610_070--Hb_024650_010 Hb_000836_220 Hb_000836_220 Hb_001610_070--Hb_000836_220 Hb_001198_160--Hb_000028_330 Hb_001198_160--Hb_000836_220 Hb_177215_020 Hb_177215_020 Hb_001198_160--Hb_177215_020 Hb_138086_010 Hb_138086_010 Hb_001198_160--Hb_138086_010 Hb_000054_140 Hb_000054_140 Hb_001198_160--Hb_000054_140 Hb_000028_330--Hb_006736_040 Hb_001518_030 Hb_001518_030 Hb_000028_330--Hb_001518_030 Hb_029622_090 Hb_029622_090 Hb_000028_330--Hb_029622_090 Hb_026048_030 Hb_026048_030 Hb_000028_330--Hb_026048_030 Hb_002374_030 Hb_002374_030 Hb_011915_020--Hb_002374_030 Hb_011915_020--Hb_029622_090 Hb_011915_020--Hb_001198_160 Hb_010721_010 Hb_010721_010 Hb_011915_020--Hb_010721_010 Hb_002048_070 Hb_002048_070 Hb_011915_020--Hb_002048_070 Hb_006736_040--Hb_024650_010 Hb_003435_040 Hb_003435_040 Hb_006736_040--Hb_003435_040 Hb_001013_080 Hb_001013_080 Hb_006736_040--Hb_001013_080 Hb_006736_040--Hb_001518_030 Hb_024650_010--Hb_003435_040 Hb_024650_010--Hb_001518_030 Hb_024650_010--Hb_026048_030 Hb_024650_010--Hb_000028_330 Hb_002725_080 Hb_002725_080 Hb_024650_010--Hb_002725_080 Hb_002370_060 Hb_002370_060 Hb_000836_220--Hb_002370_060 Hb_000836_220--Hb_000054_140 Hb_000836_220--Hb_177215_020 Hb_006573_280 Hb_006573_280 Hb_000836_220--Hb_006573_280 Hb_000836_220--Hb_000028_330
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 5.40942 4.43285 5.22607 0.0236324 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0536821 0 0 0.748967 1.37661

CAGE analysis