Hb_001623_070

Information

Type -
Description -
Location Contig1623: 39223-41962
Sequence    

Annotation

kegg
ID rcu:RCOM_1021910
description cytochrome B5 isoform 1, putative (EC:1.7.1.1)
nr
ID XP_002518143.1
description cytochrome B5 isoform 1, putative [Ricinus communis]
swissprot
ID P49098
description Cytochrome b5 OS=Nicotiana tabacum PE=2 SV=1
trembl
ID B9RWM4
description Cytochrome B5 isoform 1, putative OS=Ricinus communis GN=RCOM_1021910 PE=3 SV=1
Gene Ontology
ID GO:0020037
description cytochrome b5-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_14675: 39377-39546
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001623_070 0.0 - - cytochrome B5 isoform 1, putative [Ricinus communis]
2 Hb_002890_070 0.1979130998 - - ATP-dependent RNA helicase family protein [Populus trichocarpa]
3 Hb_003376_380 0.2039978189 - - PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Jatropha curcas]
4 Hb_003398_020 0.2114769841 - - PREDICTED: uncharacterized protein LOC105647439 [Jatropha curcas]
5 Hb_001439_090 0.2129421515 - - conserved hypothetical protein [Ricinus communis]
6 Hb_011609_110 0.2191865339 - - PREDICTED: T-complex protein 1 subunit gamma-like [Jatropha curcas]
7 Hb_042871_010 0.2224313067 - - PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal-like [Jatropha curcas]
8 Hb_020805_060 0.2227697784 - - PREDICTED: protein S-acyltransferase 21 [Jatropha curcas]
9 Hb_000239_110 0.2238546123 - - PREDICTED: adenine phosphoribosyltransferase 1-like [Jatropha curcas]
10 Hb_001449_100 0.2373682935 - - PREDICTED: transcription factor bHLH149 [Jatropha curcas]
11 Hb_007441_170 0.2375887579 - - PREDICTED: rac-like GTP-binding protein RAC2 [Jatropha curcas]
12 Hb_001016_080 0.2416574003 - - hypothetical protein EUGRSUZ_J02452 [Eucalyptus grandis]
13 Hb_001016_070 0.2423867194 - - PREDICTED: putative MO25-like protein At5g47540 [Jatropha curcas]
14 Hb_004679_060 0.242894943 - - conserved hypothetical protein [Ricinus communis]
15 Hb_001911_070 0.2438818974 - - -
16 Hb_000025_440 0.2499319559 - - PREDICTED: ankyrin repeat-containing protein P16F5.05c-like [Populus euphratica]
17 Hb_003057_020 0.2543597387 - - 40S ribosomal protein S23, putative [Ricinus communis]
18 Hb_000656_410 0.2570302228 - - hypothetical protein POPTR_0003s06410g [Populus trichocarpa]
19 Hb_005144_190 0.2583922076 - - hypothetical protein F383_09558 [Gossypium arboreum]
20 Hb_002890_080 0.2585852458 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_001623_070 Hb_001623_070 Hb_002890_070 Hb_002890_070 Hb_001623_070--Hb_002890_070 Hb_003376_380 Hb_003376_380 Hb_001623_070--Hb_003376_380 Hb_003398_020 Hb_003398_020 Hb_001623_070--Hb_003398_020 Hb_001439_090 Hb_001439_090 Hb_001623_070--Hb_001439_090 Hb_011609_110 Hb_011609_110 Hb_001623_070--Hb_011609_110 Hb_042871_010 Hb_042871_010 Hb_001623_070--Hb_042871_010 Hb_006277_070 Hb_006277_070 Hb_002890_070--Hb_006277_070 Hb_012573_010 Hb_012573_010 Hb_002890_070--Hb_012573_010 Hb_002890_080 Hb_002890_080 Hb_002890_070--Hb_002890_080 Hb_003732_040 Hb_003732_040 Hb_002890_070--Hb_003732_040 Hb_002890_070--Hb_001439_090 Hb_003376_380--Hb_003398_020 Hb_003057_020 Hb_003057_020 Hb_003376_380--Hb_003057_020 Hb_000239_110 Hb_000239_110 Hb_003376_380--Hb_000239_110 Hb_002900_130 Hb_002900_130 Hb_003376_380--Hb_002900_130 Hb_001449_100 Hb_001449_100 Hb_003376_380--Hb_001449_100 Hb_003398_020--Hb_000239_110 Hb_004429_110 Hb_004429_110 Hb_003398_020--Hb_004429_110 Hb_007313_080 Hb_007313_080 Hb_003398_020--Hb_007313_080 Hb_003398_020--Hb_002900_130 Hb_003398_020--Hb_001449_100 Hb_001439_090--Hb_002890_080 Hb_103739_010 Hb_103739_010 Hb_001439_090--Hb_103739_010 Hb_006469_120 Hb_006469_120 Hb_001439_090--Hb_006469_120 Hb_024650_040 Hb_024650_040 Hb_001439_090--Hb_024650_040 Hb_033834_050 Hb_033834_050 Hb_011609_110--Hb_033834_050 Hb_000656_410 Hb_000656_410 Hb_011609_110--Hb_000656_410 Hb_011609_110--Hb_001449_100 Hb_011609_110--Hb_042871_010 Hb_028271_020 Hb_028271_020 Hb_011609_110--Hb_028271_020 Hb_002784_100 Hb_002784_100 Hb_011609_110--Hb_002784_100 Hb_042871_010--Hb_000656_410 Hb_042871_010--Hb_033834_050 Hb_000062_300 Hb_000062_300 Hb_042871_010--Hb_000062_300 Hb_042871_010--Hb_000239_110 Hb_014497_080 Hb_014497_080 Hb_042871_010--Hb_014497_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.787282 4.09019 13.7174 12.4064 0.249882 0.199672
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
12.0572 77.6382 0.8543 4.46568 1.81216

CAGE analysis