Hb_001623_100

Information

Type -
Description -
Location Contig1623: 57916-59166
Sequence    

Annotation

kegg
ID rcu:RCOM_1023290
description Hydroxyethylthiazole kinase, putative (EC:2.7.1.50)
nr
ID XP_002518167.1
description Hydroxyethylthiazole kinase, putative [Ricinus communis]
swissprot
ID Q9LIQ4
description Hydroxyethylthiazole kinase OS=Arabidopsis thaliana GN=THIM PE=1 SV=1
trembl
ID B9RWP8
description Hydroxyethylthiazole kinase, putative OS=Ricinus communis GN=RCOM_1023290 PE=3 SV=1
Gene Ontology
ID GO:0004417
description hydroxyethylthiazole kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_14680: 58011-59096
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001623_100 0.0 - - Hydroxyethylthiazole kinase, putative [Ricinus communis]
2 Hb_004129_090 0.1040803846 - - PREDICTED: uncharacterized protein LOC105646039 [Jatropha curcas]
3 Hb_014497_100 0.1167250942 - - PREDICTED: AT-rich interactive domain-containing protein 5 isoform X2 [Jatropha curcas]
4 Hb_002316_140 0.1237498478 - - PREDICTED: rac-like GTP-binding protein 3 [Populus euphratica]
5 Hb_001178_010 0.1261493249 - - PREDICTED: uncharacterized protein LOC105629461 [Jatropha curcas]
6 Hb_010098_020 0.1303498674 - - PREDICTED: protein BOLA4, chloroplastic/mitochondrial [Jatropha curcas]
7 Hb_002972_010 0.1425383798 - - PREDICTED: magnesium-dependent phosphatase 1 [Jatropha curcas]
8 Hb_000390_090 0.1482568949 - - PREDICTED: uncharacterized protein LOC105632476 [Jatropha curcas]
9 Hb_077549_010 0.1505790305 - - PREDICTED: uncharacterized protein LOC105644817 isoform X1 [Jatropha curcas]
10 Hb_000008_370 0.1514302651 - - PREDICTED: uncharacterized protein LOC105628095 [Jatropha curcas]
11 Hb_000035_160 0.1517316078 - - PREDICTED: formin-like protein 18 [Jatropha curcas]
12 Hb_002092_120 0.1522641592 - - PREDICTED: peptidyl-tRNA hydrolase, chloroplastic [Jatropha curcas]
13 Hb_000905_120 0.1546582887 - - PREDICTED: uncharacterized protein LOC105628677 [Jatropha curcas]
14 Hb_000349_270 0.1558067478 - - PREDICTED: uncharacterized protein ycf49 isoform X1 [Jatropha curcas]
15 Hb_009847_030 0.1562544279 - - zinc finger family protein [Populus trichocarpa]
16 Hb_000413_240 0.1574139763 - - PREDICTED: transcription factor ILR3-like isoform X2 [Jatropha curcas]
17 Hb_000537_100 0.1579214725 - - Coiled-coil domain-containing protein, putative [Ricinus communis]
18 Hb_001056_030 0.1589927944 - - PREDICTED: probable inactive purple acid phosphatase 16 isoform X2 [Jatropha curcas]
19 Hb_001105_170 0.1591102383 - - PREDICTED: uncharacterized protein LOC105642727 isoform X1 [Jatropha curcas]
20 Hb_001769_170 0.1595115293 - - 50S ribosomal protein L31, putative [Ricinus communis]

Gene co-expression network

sample Hb_001623_100 Hb_001623_100 Hb_004129_090 Hb_004129_090 Hb_001623_100--Hb_004129_090 Hb_014497_100 Hb_014497_100 Hb_001623_100--Hb_014497_100 Hb_002316_140 Hb_002316_140 Hb_001623_100--Hb_002316_140 Hb_001178_010 Hb_001178_010 Hb_001623_100--Hb_001178_010 Hb_010098_020 Hb_010098_020 Hb_001623_100--Hb_010098_020 Hb_002972_010 Hb_002972_010 Hb_001623_100--Hb_002972_010 Hb_004129_090--Hb_014497_100 Hb_004129_090--Hb_001178_010 Hb_004129_090--Hb_010098_020 Hb_004129_090--Hb_002316_140 Hb_001541_110 Hb_001541_110 Hb_004129_090--Hb_001541_110 Hb_014497_100--Hb_001178_010 Hb_014497_100--Hb_002316_140 Hb_000537_100 Hb_000537_100 Hb_014497_100--Hb_000537_100 Hb_005946_040 Hb_005946_040 Hb_014497_100--Hb_005946_040 Hb_000163_260 Hb_000163_260 Hb_014497_100--Hb_000163_260 Hb_002572_020 Hb_002572_020 Hb_002316_140--Hb_002572_020 Hb_002316_140--Hb_010098_020 Hb_002316_140--Hb_000537_100 Hb_002316_140--Hb_001178_010 Hb_073973_090 Hb_073973_090 Hb_002316_140--Hb_073973_090 Hb_001178_010--Hb_000537_100 Hb_001900_140 Hb_001900_140 Hb_001178_010--Hb_001900_140 Hb_000926_200 Hb_000926_200 Hb_001178_010--Hb_000926_200 Hb_010098_020--Hb_000537_100 Hb_002284_210 Hb_002284_210 Hb_010098_020--Hb_002284_210 Hb_146255_020 Hb_146255_020 Hb_010098_020--Hb_146255_020 Hb_006615_050 Hb_006615_050 Hb_010098_020--Hb_006615_050 Hb_010098_020--Hb_002572_020 Hb_001056_030 Hb_001056_030 Hb_002972_010--Hb_001056_030 Hb_001114_160 Hb_001114_160 Hb_002972_010--Hb_001114_160 Hb_003556_030 Hb_003556_030 Hb_002972_010--Hb_003556_030 Hb_001712_070 Hb_001712_070 Hb_002972_010--Hb_001712_070 Hb_000390_090 Hb_000390_090 Hb_002972_010--Hb_000390_090 Hb_000413_060 Hb_000413_060 Hb_002972_010--Hb_000413_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.67628 1.2814 4.1651 2.52019 1.06991 0.955719
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.97406 3.07016 0.392107 0.438953 2.25288

CAGE analysis