Hb_001623_580

Information

Type -
Description -
Location Contig1623: 443224-445182
Sequence    

Annotation

kegg
ID rcu:RCOM_2009430
description histone-lysine n-methyltransferase, suvh, putative
nr
ID XP_012077634.1
description PREDICTED: histone-lysine N-methyltransferase family member SUVH9-like [Jatropha curcas]
swissprot
ID Q9T0G7
description Histone-lysine N-methyltransferase family member SUVH9 OS=Arabidopsis thaliana GN=SUVH9 PE=1 SV=1
trembl
ID A0A067KB37
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12891 PE=4 SV=1
Gene Ontology
ID GO:0016740
description histone-lysine n-methyltransferase family member suvh9

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001623_580 0.0 - - PREDICTED: histone-lysine N-methyltransferase family member SUVH9-like [Jatropha curcas]
2 Hb_003605_070 0.0789912481 - - PREDICTED: angio-associated migratory cell protein [Jatropha curcas]
3 Hb_004032_050 0.0890344835 - - hypothetical protein CISIN_1g014592mg [Citrus sinensis]
4 Hb_002276_190 0.0909050466 - - PREDICTED: uncharacterized protein LOC105640686 [Jatropha curcas]
5 Hb_005288_160 0.0924685631 - - PREDICTED: uncharacterized protein LOC105647746 isoform X1 [Jatropha curcas]
6 Hb_000209_090 0.093503007 - - PREDICTED: 60S ribosomal protein L7-2-like [Jatropha curcas]
7 Hb_000284_200 0.0993418265 - - -
8 Hb_001016_060 0.0999035278 - - conserved hypothetical protein [Ricinus communis]
9 Hb_128548_020 0.1001626309 - - PREDICTED: transmembrane protein 56-like [Jatropha curcas]
10 Hb_007534_040 0.105161833 - - PREDICTED: uncharacterized protein LOC105635538 [Jatropha curcas]
11 Hb_006261_040 0.1060435576 - - PREDICTED: uncharacterized protein LOC105646602 [Jatropha curcas]
12 Hb_000175_490 0.1062483198 - - PREDICTED: probable polygalacturonase At1g80170 isoform X1 [Jatropha curcas]
13 Hb_000236_300 0.1067629546 - - PREDICTED: RNA-binding protein pno1-like [Jatropha curcas]
14 Hb_010810_050 0.1090723913 - - hypothetical protein [Cleome spinosa]
15 Hb_003126_040 0.1095288016 - - conserved hypothetical protein [Ricinus communis]
16 Hb_002007_250 0.1101735384 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000940_040 0.1104577648 - - PREDICTED: protein XAP5 CIRCADIAN TIMEKEEPER isoform X1 [Jatropha curcas]
18 Hb_000768_030 0.1108584357 - - PREDICTED: ELMO domain-containing protein A isoform X1 [Jatropha curcas]
19 Hb_007111_040 0.1120661766 - - PREDICTED: uncharacterized protein LOC105628142 isoform X1 [Jatropha curcas]
20 Hb_000997_020 0.1121718007 - - PREDICTED: uncharacterized protein LOC105629694 [Jatropha curcas]

Gene co-expression network

sample Hb_001623_580 Hb_001623_580 Hb_003605_070 Hb_003605_070 Hb_001623_580--Hb_003605_070 Hb_004032_050 Hb_004032_050 Hb_001623_580--Hb_004032_050 Hb_002276_190 Hb_002276_190 Hb_001623_580--Hb_002276_190 Hb_005288_160 Hb_005288_160 Hb_001623_580--Hb_005288_160 Hb_000209_090 Hb_000209_090 Hb_001623_580--Hb_000209_090 Hb_000284_200 Hb_000284_200 Hb_001623_580--Hb_000284_200 Hb_003605_070--Hb_005288_160 Hb_003605_070--Hb_000209_090 Hb_001016_060 Hb_001016_060 Hb_003605_070--Hb_001016_060 Hb_003605_070--Hb_002276_190 Hb_000847_070 Hb_000847_070 Hb_003605_070--Hb_000847_070 Hb_004032_050--Hb_002276_190 Hb_000307_170 Hb_000307_170 Hb_004032_050--Hb_000307_170 Hb_000175_490 Hb_000175_490 Hb_004032_050--Hb_000175_490 Hb_000768_030 Hb_000768_030 Hb_004032_050--Hb_000768_030 Hb_004032_050--Hb_003605_070 Hb_002276_190--Hb_000175_490 Hb_002276_190--Hb_005288_160 Hb_002276_190--Hb_000768_030 Hb_000733_060 Hb_000733_060 Hb_005288_160--Hb_000733_060 Hb_023226_060 Hb_023226_060 Hb_005288_160--Hb_023226_060 Hb_128548_020 Hb_128548_020 Hb_005288_160--Hb_128548_020 Hb_002631_050 Hb_002631_050 Hb_005288_160--Hb_002631_050 Hb_003453_020 Hb_003453_020 Hb_005288_160--Hb_003453_020 Hb_000976_270 Hb_000976_270 Hb_000209_090--Hb_000976_270 Hb_001741_140 Hb_001741_140 Hb_000209_090--Hb_001741_140 Hb_007534_040 Hb_007534_040 Hb_000209_090--Hb_007534_040 Hb_004044_020 Hb_004044_020 Hb_000209_090--Hb_004044_020 Hb_004525_100 Hb_004525_100 Hb_000209_090--Hb_004525_100 Hb_002681_140 Hb_002681_140 Hb_000284_200--Hb_002681_140 Hb_000015_010 Hb_000015_010 Hb_000284_200--Hb_000015_010 Hb_000284_200--Hb_000847_070 Hb_004502_030 Hb_004502_030 Hb_000284_200--Hb_004502_030 Hb_006637_060 Hb_006637_060 Hb_000284_200--Hb_006637_060 Hb_001514_200 Hb_001514_200 Hb_000284_200--Hb_001514_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.15112 0.481537 0.38223 0.352243 3.66561 2.81228
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.06709 1.67891 0.78495 0.447511 0.349471

CAGE analysis