Hb_001625_030

Information

Type -
Description -
Location Contig1625: 28916-31189
Sequence    

Annotation

kegg
ID rcu:RCOM_1682320
description Cucumisin precursor, putative (EC:3.4.21.25)
nr
ID KDP25551.1
description hypothetical protein JCGZ_20707 [Jatropha curcas]
swissprot
ID O64495
description Subtilisin-like protease SBT1.2 OS=Arabidopsis thaliana GN=SBT1.2 PE=2 SV=1
trembl
ID A0A067JNI9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20707 PE=4 SV=1
Gene Ontology
ID GO:0004252
description subtilisin-like protease sdd1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001625_030 0.0 - - hypothetical protein JCGZ_20707 [Jatropha curcas]
2 Hb_001821_130 0.1247875518 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_20174 [Jatropha curcas]
3 Hb_003090_260 0.1277929464 - - hypothetical protein JCGZ_25097 [Jatropha curcas]
4 Hb_011671_410 0.1314906444 transcription factor TF Family: SET histone-lysine n-methyltransferase, suvh, putative [Ricinus communis]
5 Hb_002157_080 0.1443822415 - - PREDICTED: uncharacterized protein LOC105628780 isoform X2 [Jatropha curcas]
6 Hb_002542_110 0.1453445111 - - PREDICTED: uncharacterized protein LOC105642479 [Jatropha curcas]
7 Hb_005725_210 0.1456443563 - - PREDICTED: RNA-binding protein 1 [Jatropha curcas]
8 Hb_000103_390 0.1464444658 - - Pentatricopeptide repeat superfamily protein [Theobroma cacao]
9 Hb_005116_110 0.1472577131 - - PREDICTED: uncharacterized protein LOC105640215 [Jatropha curcas]
10 Hb_001488_180 0.1493658654 - - PREDICTED: uncharacterized protein LOC105644152 isoform X1 [Jatropha curcas]
11 Hb_000808_030 0.1505044208 transcription factor TF Family: PHD PREDICTED: uncharacterized protein LOC105647456 [Jatropha curcas]
12 Hb_005706_040 0.1511524157 - - PREDICTED: uncharacterized protein LOC105642418 [Jatropha curcas]
13 Hb_004970_170 0.1513888217 transcription factor TF Family: bZIP PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5 [Jatropha curcas]
14 Hb_000170_130 0.1516999144 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ASHH2 [Jatropha curcas]
15 Hb_002960_080 0.1546214135 transcription factor TF Family: IWS1 PREDICTED: uncharacterized protein LOC105635322 [Jatropha curcas]
16 Hb_000599_190 0.1601742821 transcription factor TF Family: SNF2 DNA repair and recombination protein RAD26, putative [Ricinus communis]
17 Hb_145022_010 0.1602057109 - - hypothetical protein JCGZ_22699 [Jatropha curcas]
18 Hb_079326_020 0.1617043705 - - conserved hypothetical protein [Ricinus communis]
19 Hb_001405_070 0.162058606 - - PREDICTED: pentatricopeptide repeat-containing protein At3g23020 [Jatropha curcas]
20 Hb_007234_010 0.1621299778 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor RAP2-4-like [Jatropha curcas]

Gene co-expression network

sample Hb_001625_030 Hb_001625_030 Hb_001821_130 Hb_001821_130 Hb_001625_030--Hb_001821_130 Hb_003090_260 Hb_003090_260 Hb_001625_030--Hb_003090_260 Hb_011671_410 Hb_011671_410 Hb_001625_030--Hb_011671_410 Hb_002157_080 Hb_002157_080 Hb_001625_030--Hb_002157_080 Hb_002542_110 Hb_002542_110 Hb_001625_030--Hb_002542_110 Hb_005725_210 Hb_005725_210 Hb_001625_030--Hb_005725_210 Hb_002960_080 Hb_002960_080 Hb_001821_130--Hb_002960_080 Hb_006117_080 Hb_006117_080 Hb_001821_130--Hb_006117_080 Hb_000321_150 Hb_000321_150 Hb_001821_130--Hb_000321_150 Hb_007575_080 Hb_007575_080 Hb_001821_130--Hb_007575_080 Hb_000661_130 Hb_000661_130 Hb_001821_130--Hb_000661_130 Hb_043362_010 Hb_043362_010 Hb_001821_130--Hb_043362_010 Hb_004223_030 Hb_004223_030 Hb_003090_260--Hb_004223_030 Hb_003090_260--Hb_011671_410 Hb_003090_260--Hb_005725_210 Hb_001969_110 Hb_001969_110 Hb_003090_260--Hb_001969_110 Hb_002704_070 Hb_002704_070 Hb_003090_260--Hb_002704_070 Hb_000170_130 Hb_000170_130 Hb_011671_410--Hb_000170_130 Hb_005736_020 Hb_005736_020 Hb_011671_410--Hb_005736_020 Hb_000204_120 Hb_000204_120 Hb_011671_410--Hb_000204_120 Hb_000672_040 Hb_000672_040 Hb_011671_410--Hb_000672_040 Hb_062226_070 Hb_062226_070 Hb_011671_410--Hb_062226_070 Hb_001999_290 Hb_001999_290 Hb_011671_410--Hb_001999_290 Hb_000015_170 Hb_000015_170 Hb_002157_080--Hb_000015_170 Hb_002157_080--Hb_002542_110 Hb_001488_180 Hb_001488_180 Hb_002157_080--Hb_001488_180 Hb_009658_030 Hb_009658_030 Hb_002157_080--Hb_009658_030 Hb_001473_110 Hb_001473_110 Hb_002157_080--Hb_001473_110 Hb_000347_400 Hb_000347_400 Hb_002157_080--Hb_000347_400 Hb_000640_040 Hb_000640_040 Hb_002542_110--Hb_000640_040 Hb_010068_080 Hb_010068_080 Hb_002542_110--Hb_010068_080 Hb_001716_040 Hb_001716_040 Hb_002542_110--Hb_001716_040 Hb_002686_090 Hb_002686_090 Hb_002542_110--Hb_002686_090 Hb_002542_110--Hb_001488_180 Hb_002798_070 Hb_002798_070 Hb_005725_210--Hb_002798_070 Hb_000442_010 Hb_000442_010 Hb_005725_210--Hb_000442_010 Hb_003030_060 Hb_003030_060 Hb_005725_210--Hb_003030_060 Hb_004916_010 Hb_004916_010 Hb_005725_210--Hb_004916_010 Hb_002818_030 Hb_002818_030 Hb_005725_210--Hb_002818_030 Hb_001828_130 Hb_001828_130 Hb_005725_210--Hb_001828_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0193168 0.186497 0.0649854 0.0566422 0.0403774 0.106267
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.097955 0.0770773 0.0879798 0.055134 0.130772

CAGE analysis