Hb_001629_110

Information

Type -
Description -
Location Contig1629: 69391-71422
Sequence    

Annotation

kegg
ID mdm:103430121
description uncharacterized LOC103430121
nr
ID XP_012070649.1
description PREDICTED: uncharacterized protein LOC105632808 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L4B1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00696 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_14790: 69429-71393
cDNA
(Sanger)
(ID:Location)		 031_H18.ab1: 69584-71357 , 035_L01.ab1: 69467-71347

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001629_110 0.0 - - PREDICTED: uncharacterized protein LOC105632808 [Jatropha curcas]
2 Hb_007576_040 0.0832995341 - - PREDICTED: uncharacterized protein LOC105169221 [Sesamum indicum]
3 Hb_000046_280 0.0889074653 - - PREDICTED: uncharacterized protein LOC105631831 isoform X1 [Jatropha curcas]
4 Hb_001512_060 0.0896768106 - - PREDICTED: pentatricopeptide repeat-containing protein At4g35850, mitochondrial [Jatropha curcas]
5 Hb_000015_080 0.0918212188 - - PREDICTED: uncharacterized protein LOC105647918 isoform X1 [Jatropha curcas]
6 Hb_063716_050 0.0932584465 - - PREDICTED: uncharacterized protein LOC105634866 [Jatropha curcas]
7 Hb_012675_090 0.0950630681 - - PREDICTED: DNA-directed RNA polymerase II subunit 4-like isoform X1 [Citrus sinensis]
8 Hb_021443_070 0.0955513977 - - PREDICTED: cysteine and histidine-rich domain-containing protein RAR1 isoform X1 [Jatropha curcas]
9 Hb_000352_110 0.0958862859 - - DNA topoisomerase II, putative [Ricinus communis]
10 Hb_004440_090 0.0960913845 - - PREDICTED: phosphopantetheine adenylyltransferase [Jatropha curcas]
11 Hb_002006_020 0.096174927 - - PREDICTED: uncharacterized protein LOC105650638 [Jatropha curcas]
12 Hb_011867_010 0.0966098237 - - PREDICTED: uncharacterized protein LOC105641409 [Jatropha curcas]
13 Hb_000019_210 0.0967300457 transcription factor TF Family: GNAT PREDICTED: N-alpha-acetyltransferase MAK3 [Jatropha curcas]
14 Hb_002963_020 0.0969916029 - - conserved hypothetical protein [Ricinus communis]
15 Hb_017904_010 0.0979564275 - - PREDICTED: DNA repair protein recA homolog 2, mitochondrial [Jatropha curcas]
16 Hb_001703_030 0.0987752356 transcription factor TF Family: SET Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor, putative [Ricinus communis]
17 Hb_002928_130 0.0988071498 - - PREDICTED: small nuclear ribonucleoprotein Sm D3 [Jatropha curcas]
18 Hb_003050_080 0.0992084364 - - 40S ribosomal protein S14, putative [Ricinus communis]
19 Hb_001489_060 0.0992546263 - - PREDICTED: uncharacterized protein LOC105649778 isoform X2 [Jatropha curcas]
20 Hb_010128_130 0.1003575838 - - PREDICTED: G patch domain-containing protein 8 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_001629_110 Hb_001629_110 Hb_007576_040 Hb_007576_040 Hb_001629_110--Hb_007576_040 Hb_000046_280 Hb_000046_280 Hb_001629_110--Hb_000046_280 Hb_001512_060 Hb_001512_060 Hb_001629_110--Hb_001512_060 Hb_000015_080 Hb_000015_080 Hb_001629_110--Hb_000015_080 Hb_063716_050 Hb_063716_050 Hb_001629_110--Hb_063716_050 Hb_012675_090 Hb_012675_090 Hb_001629_110--Hb_012675_090 Hb_010661_030 Hb_010661_030 Hb_007576_040--Hb_010661_030 Hb_007951_060 Hb_007951_060 Hb_007576_040--Hb_007951_060 Hb_005503_030 Hb_005503_030 Hb_007576_040--Hb_005503_030 Hb_007576_040--Hb_063716_050 Hb_000327_120 Hb_000327_120 Hb_007576_040--Hb_000327_120 Hb_007576_040--Hb_001512_060 Hb_004440_090 Hb_004440_090 Hb_000046_280--Hb_004440_090 Hb_012725_050 Hb_012725_050 Hb_000046_280--Hb_012725_050 Hb_002214_040 Hb_002214_040 Hb_000046_280--Hb_002214_040 Hb_000046_280--Hb_007576_040 Hb_001703_030 Hb_001703_030 Hb_000046_280--Hb_001703_030 Hb_000392_440 Hb_000392_440 Hb_000046_280--Hb_000392_440 Hb_010921_010 Hb_010921_010 Hb_001512_060--Hb_010921_010 Hb_000362_200 Hb_000362_200 Hb_001512_060--Hb_000362_200 Hb_001534_120 Hb_001534_120 Hb_001512_060--Hb_001534_120 Hb_007477_070 Hb_007477_070 Hb_001512_060--Hb_007477_070 Hb_007154_020 Hb_007154_020 Hb_001512_060--Hb_007154_020 Hb_002346_020 Hb_002346_020 Hb_001512_060--Hb_002346_020 Hb_002928_130 Hb_002928_130 Hb_000015_080--Hb_002928_130 Hb_011360_140 Hb_011360_140 Hb_000015_080--Hb_011360_140 Hb_003540_040 Hb_003540_040 Hb_000015_080--Hb_003540_040 Hb_000015_080--Hb_000392_440 Hb_005993_040 Hb_005993_040 Hb_000015_080--Hb_005993_040 Hb_000392_270 Hb_000392_270 Hb_000015_080--Hb_000392_270 Hb_000103_560 Hb_000103_560 Hb_063716_050--Hb_000103_560 Hb_001489_060 Hb_001489_060 Hb_063716_050--Hb_001489_060 Hb_003050_080 Hb_003050_080 Hb_063716_050--Hb_003050_080 Hb_000529_190 Hb_000529_190 Hb_063716_050--Hb_000529_190 Hb_000832_140 Hb_000832_140 Hb_063716_050--Hb_000832_140 Hb_001604_080 Hb_001604_080 Hb_063716_050--Hb_001604_080 Hb_010128_130 Hb_010128_130 Hb_012675_090--Hb_010128_130 Hb_003126_040 Hb_003126_040 Hb_012675_090--Hb_003126_040 Hb_143766_090 Hb_143766_090 Hb_012675_090--Hb_143766_090 Hb_001741_140 Hb_001741_140 Hb_012675_090--Hb_001741_140 Hb_010810_050 Hb_010810_050 Hb_012675_090--Hb_010810_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
44.4555 8.39228 18.0969 11.8474 53.1408 34.3357
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
33.2469 53.6964 31.1477 15.9718 17.9672

CAGE analysis